RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PRKAR2BP31323 418 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 KIF5BP33176 963 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 EPHX2P34913 555 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 ID1P41134 155 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 IER3P46695 156 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 ZNF131P52739 623 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 SLC25A1P53007 311 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 GMFBP60983 142 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 SLC3A1Q07837 685 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 LCP2Q13094 533 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 KIAA0040Q15053 153 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 ACKR1Q16570 336 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 CCDC40Q4G0X9 1142 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 C14orf28Q4W4Y0 310 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 TATDN1Q6P1N9 297 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 SIAH3Q8IW03 269 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 UBQLNLQ8IYU4 475 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 LEMD2Q8NC56 503 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 ICA1LQ8NDH6 482 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 LINC01006Q8NI28 216 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 CKAP2Q8WWK9 683 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 PRCCQ92733 491 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-210ENST00000553693 NTNG2Q96CW9 530 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 C5orf30Q96GV9 206 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 MAGEB18Q96M61 343 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 ZNF665Q9H7R5 613 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 ELL3Q9HB65 397 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-210ENST00000553693 GPR173Q9NS66 373 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 HMG20BQ9P0W2 317 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 MAD2L2Q9UI95 211 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 TDRKHQ9Y2W6 561 aaKnown RBP2.72□□□□□ -1.97
SCFD1-210ENST00000553693 RTL1A6NKG5 1358 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 ROCK2O75116 1388 aaKnown RBP2.72□□□□□ -1.97
SCFD1-210ENST00000553693 COL5A3P25940 1745 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 LTBP1Q14766 1721 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 NCAPD2Q15021 1401 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 SMG6Q86US8 1419 aaKnown RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 ARHGAP42A6NI28 874 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 M0R296 226 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 PRPSAP2O60256 369 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 NOL3O60936 208 aaKnown RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 CSDE1O75534 798 aaKnown RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 OR6A2O95222 327 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 APBB3O95704 486 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 OLFM2O95897 454 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 SLC16A8O95907 504 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 PGAM2P15259 253 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF18P17022 549 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 ELK1P19419 428 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 HPDP32754 393 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 SERPINB6P35237 376 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 MAGEA9P43362 315 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 BPIFB3P59826 476 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 PPP1R8Q12972 351 aaKnown RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 LASP1Q14847 261 aaKnown RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 SLC17A1Q14916 467 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 PPP1R3AQ16821 1122 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 SLC39A12Q504Y0 691 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 AGAP6Q5VW22 663 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 PM20D1Q6GTS8 502 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 PLBD1Q6P4A8 553 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 OLFM4Q6UX06 510 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 RABEPKQ7Z6M1 372 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 BATF2Q8N1L9 274 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 HDDC3Q8N4P3 179 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 GVQW1Q8N7I0 195 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF491Q8N8L2 437 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 OR1K1Q8NGR3 316 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 GANCQ8TET4 914 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 U2AF1L4Q8WU68 220 aaKnown RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 C16orf45Q96MC5 204 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 TMEM237Q96Q45 408 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 C17orf62Q9BQA9 187 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 FAM213AQ9BRX8 229 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 TEX13AQ9BXU3 409 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 XPO4Q9C0E2 1151 aaKnown RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF350Q9GZX5 532 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 DDX47Q9H0S4 455 aaKnown RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 ABCG4Q9H172 646 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 RWDD1Q9H446 243 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 SLCO1C1Q9NYB5 712 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 NARFQ9UHQ1 456 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 STRAPQ9Y3F4 350 aaKnown RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 COL4A4P53420 1690 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-210ENST00000553693 ADAMTS7Q9UKP4 1686 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 ADAMTSL1Q8N6G6 1762 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 TONSLQ96HA7 1378 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 THSD7BQ9C0I4 1608 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 NRXN2Q9P2S2 1712 aa2.71□□□□□ -1.98
SCFD1-210ENST00000553693 CASP8AP2Q9UKL3 1982 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 AFDNP55196 1824 aaKnown RBP2.7□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF831Q5JPB2 1677 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 DLEC1Q9Y238 1755 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 WI2-2373I1.2A0A1W2PRP0 233 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 C19orf81C9J6K1 198 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 SSX5O60225 188 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 KIAA0513O60268 411 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 GMNNO75496 209 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 BCAS2O75934 225 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms