RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ASPDHA6ND91 283 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF860A6NHJ4 632 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 AQP12BA6NM10 295 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 FAM220BPB1ANY3 271 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 C5orf58C9J3I9 102 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 FAM227AF5H4B4 570 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 FGF17O60258 216 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 BRINP1O60477 761 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 PLOD3O60568 738 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 LDB3O75112 727 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 PDE9AO76083 593 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 AK1P00568 194 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 SCG5P05408 212 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 RAB40ALP0C0E4 278 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 CCL4P13236 92 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 TCN1P20061 433 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 RBMS1P29558 406 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 RORAP35398 523 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 STT3AP46977 705 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 NOVA1P51513 510 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 PRKAG1P54619 331 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 EMP2P54851 167 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 DCAF7P61962 342 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 RPS15P62841 145 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 KCNJ2P63252 427 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 PSPHP78330 225 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 OLR1P78380 273 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 IGLV3-21P80748 117 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 MAT1AQ00266 395 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 NHLH1Q02575 133 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 VEZF1Q14119 521 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 FLOT2Q14254 428 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ERV3-1Q14264 604 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 CAPRIN1Q14444 709 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 RGNQ15493 299 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 NSDHLQ15738 373 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 CYP51A1Q16850 503 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF630Q2M218 657 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 MINDY4Q4G0A6 757 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 HES3Q5TGS1 186 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 C1orf189Q5VU69 101 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 SAXO2Q658L1 398 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 STEAP3Q658P3 488 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 CPZQ66K79 652 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 GLYATQ6IB77 296 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 AAGABQ6PD74 315 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 DHRS13Q6UX07 377 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ASCL5Q7RTU5 278 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 PRSS41Q7RTY9 318 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF551Q7Z340 670 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 DGLUCYQ7Z3D6 616 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 IFNEQ86WN2 208 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 PTRH1Q86Y79 214 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 HPS6Q86YV9 775 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 OR4N5Q8IXE1 308 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 AQP12AQ8IXF9 295 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 MICU2Q8IYU8 434 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 CLECL1Q8IZS7 167 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ESX1Q8N693 406 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 LINC00482Q8N8I6 264 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 BMPERQ8N8U9 685 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 C11orf65Q8NCR3 313 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 OR7G1Q8NGA0 311 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 STT3BQ8TCJ2 826 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 MIPOL1Q8TD10 442 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 SLC26A7Q8TE54 656 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 RASSF5Q8WWW0 418 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ADAMTS14Q8WXS8 1223 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 RIT1Q92963 219 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 STMN2Q93045 179 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 MR1Q95460 341 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 NCLNQ969V3 563 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 NACC2Q96BF6 587 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ANKRD9Q96BM1 317 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ELP4Q96EB1 424 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 NEURL3Q96EH8 262 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 CNRIP1Q96F85 164 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 REXO5Q96IC2 774 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 SLC35G5Q96KT7 338 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF583Q96ND8 569 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 TACO1Q9BSH4 297 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 EFHD1Q9BUP0 239 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 SPATA5L1Q9BVQ7 753 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 UGT2B28Q9BY64 529 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ACTRT3Q9BYD9 372 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ULBP3Q9BZM4 244 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 TMEM38AQ9H6F2 299 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 KAT8Q9H7Z6 458 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 GORASP2Q9H8Y8 452 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 WDR54Q9H977 334 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 SYNPO2LQ9H987 977 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 CACYBPQ9HB71 228 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 APMAPQ9HDC9 416 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 PNO1Q9NRX1 252 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ZCCHC3Q9NUD5 404 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 DDX18Q9NVP1 670 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 CMTM6Q9NX76 183 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 GIN1Q9NXP7 522 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 ACTR3BQ9P1U1 418 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 C5AR2Q9P296 337 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms