RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SLC5A8Q8N695 610 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 OR5D16Q8NGK9 328 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 FCGR1BQ92637 280 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 HOXB13Q92826 284 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-221ENST00000553498 SLC38A4Q969I6 547 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 CTHRC1Q96CG8 243 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 PRRC1Q96M27 445 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 Q96MT0 163 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 CITED4Q96RK1 184 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 NODALQ96S42 347 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 ARHGDIGQ99819 225 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 DPYSL5Q9BPU6 564 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 DUSP23Q9BVJ7 150 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 FNDC11Q9BVV2 318 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 YIPF3Q9GZM5 350 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 MIR1-1HGQ9H1L0 117 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 SLC38A1Q9H2H9 487 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 CDC14AQ9UNH5 594 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 CLCA2Q9UQC9 943 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 SNX11Q9Y5W9 270 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 CEPT1Q9Y6K0 416 aa6.83□□□□□ -1.32
ATXN3-221ENST00000553498 A0A1B0GTW7 788 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PRAMEF27A3QJZ7 478 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 CCDC160A6NGH7 325 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PRAMEF25A6NGN4 478 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 SLC9B1P1A6NJY1 282 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 SLC1A7O00341 560 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 DUX1O43812 170 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MITFO75030 526 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 STX11O75558 287 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PRKRAO75569 313 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 SEC14L2O76054 403 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 OR5F1O95221 314 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 RECKO95980 971 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 STATHP02808 62 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 CHRM4P08173 479 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 C8orf89P0DMQ9 161 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 ALPPL2P10696 532 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 OSMP13725 252 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PVRP15151 417 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 TYRP1P17643 537 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 NT5EP21589 574 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 ELAVL4P26378 380 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 DCKP27707 260 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 ELK4P28324 431 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 HOXD12P35452 270 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 KRT20P35900 424 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MAP3K8P41279 467 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 CTSKP43235 329 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 GABRA4P48169 554 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 UGT2B15P54855 530 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PSMD4P55036 377 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MAZP56270 477 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PSPHP78330 225 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 SLC35A2P78381 396 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 SIM1P81133 766 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 IL1RL1Q01638 556 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 FUT5Q11128 374 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 ST3GAL3Q11203 375 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 DYNC1I2Q13409 638 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 ILKQ13418 452 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 ZNHIT3Q15649 155 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MEP1AQ16819 746 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PRICKLE4Q2TBC4 344 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 RPS26P11Q5JNZ5 115 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 FAM180BQ6P0A1 224 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 WDR74Q6RFH5 385 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 Q6ZS46 218 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PRSS48Q7RTY5 328 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PRSS42Q7Z5A4 293 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 RABEPKQ7Z6M1 372 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 GALNT5Q7Z7M9 940 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 WDR5BQ86VZ2 330 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 ERI1Q8IV48 349 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 P3H2Q8IVL5 708 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 SLC44A2Q8IWA5 706 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 SPARTQ8N0X7 666 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 GALNT15Q8N3T1 639 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 FRMD1Q8N878 549 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 OR7G2Q8NG99 324 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 OR52P1PQ8NH57 321 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 RHOXF1Q8NHV9 184 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 UCN3Q969E3 161 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MYDGFQ969H8 173 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 OTUB1Q96FW1 271 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 RBM18Q96H35 190 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 AHCYL2Q96HN2 611 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MEGF10Q96KG7 1140 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 GUCD1Q96NT3 240 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 OR1F2PQ96R84 312 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 DOK1Q99704 481 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 BARD1Q99728 777 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 FUZQ9BT04 418 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PRRG3Q9BZD7 231 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 UCK2Q9BZX2 261 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF350Q9GZX5 532 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 SOX17Q9H6I2 414 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-221ENST00000553498 POLR1BQ9H9Y6 1135 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms