RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 IFT20Q8IY31 132 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 PM20D2Q8IYS1 436 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ZBED8Q8IZ13 594 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 NUP93Q8N1F7 819 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 AGAP11Q8TF27 550 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ZNF473Q8WTR7 871 aaKnown RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 SLC38A5Q8WUX1 472 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 UCMAQ8WVF2 138 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 APOBEC4Q8WW27 367 aaKnown RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 LINGO1Q96FE5 620 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 USP28Q96RU2 1077 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 DDX50Q9BQ39 737 aaKnown RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 STRA6Q9BX79 667 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 C6orf62Q9GZU0 229 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 NEUROG2Q9H2A3 272 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 XKR8Q9H6D3 395 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ATP13A3Q9H7F0 1226 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 SP140LQ9H930 580 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 PALMDQ9NP74 551 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 MRPL40Q9NQ50 206 aaKnown RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 PRSS16Q9NQE7 514 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 DIABLOQ9NR28 239 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 BLOC1S4Q9NUP1 217 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ELOVL2Q9NXB9 296 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 FBXL12Q9NXK8 326 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 NLGN3Q9NZ94 848 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 PTTG2Q9NZH5 202 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 CLEC4EQ9ULY5 219 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 AP3M1Q9Y2T2 418 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 MAU2Q9Y6X3 613 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 DIDO1Q9BTC0 2240 aaKnown RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 TACC2O95359 2948 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 PKDREJQ9NTG1 2253 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 SCN1AP35498 2009 aa4.46□□□□□ -1.69
ATXN3-218ENST00000553309 C15orf38-AP3S2A0A0A6YYH1 394 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 ZCWPW2A0A1B0GU75 182 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 SH3PXD2BA1X283 911 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 HEATR9A2RTY3 570 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 ZSCAN5BA6NJL1 495 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 USP27XA6NNY8 438 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 FAM90A26D6RGX4 464 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 J3KRW8 73 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 ANKRD28O15084 1053 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 POLR1CO15160 346 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 SNAPINO95295 136 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 LYPLA2O95372 231 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 FAM107AO95990 144 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 OPN1MWP04001 364 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 OPN1MW2P0DN77 364 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 OPN1MW3P0DN78 364 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 CYP3A5P20815 502 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 UGT1A1P22309 533 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 PKLRP30613 574 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 KRT2P35908 639 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 ARCN1P48444 511 aaKnown RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 TAF6P49848 677 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 HNRNPFP52597 415 aaKnown RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 F2RL1P55085 397 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 HILS1P60008 231 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 TSPAN5P62079 268 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 RPL24P83731 157 aaKnown RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 CDC16Q13042 620 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 GAGE5Q13069 117 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 GAGE6Q13070 117 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 CUL2Q13617 745 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 RFTN1Q14699 578 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 PHKG1Q16816 387 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 TMEM215Q68D42 235 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF776Q68DI1 518 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 SPOPLQ6IQ16 392 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 DNAAF5Q86Y56 855 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 WDR49Q8IV35 697 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 DIS3L2Q8IYB7 885 aaKnown RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 LRRC34Q8IZ02 419 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF619Q8N2I2 560 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 LIX1Q8N485 282 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 CPSF7Q8N684 471 aaKnown RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 ATP6V0D2Q8N8Y2 350 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 OR2T34Q8NGX1 318 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 OR52I2Q8NH67 350 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 SLC26A7Q8TE54 656 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 SLC44A1Q8WWI5 657 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 MYLPFQ96A32 169 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 C19orf60Q96EN9 201 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 RMND5BQ96G75 393 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 CFAP57Q96MR6 1250 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF560Q96MR9 790 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 PKMYT1Q99640 499 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 HSD17B14Q9BPX1 270 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 CCDC3Q9BQI4 270 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 STRADBQ9C0K7 418 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 LRMDAQ9H2I8 198 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 OR51B5Q9H339 312 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 THAP9Q9H5L6 903 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 TFB2MQ9H5Q4 396 aaKnown RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 RANGRFQ9HD47 186 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 SCRT2Q9NQ03 307 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 GLRX2Q9NS18 164 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 INTS9Q9NV88 658 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms