RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 MIPOL1Q8TD10 442 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC9A6Q92581 669 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 JADE3Q92613 823 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 UCN3Q969E3 161 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CIDECQ96AQ7 238 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 FAM120BQ96EK7 910 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 TMEM41AQ96HV5 264 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 SLX1AQ9BQ83 275 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 ANGPTL4Q9BY76 406 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 SH2D2AQ9NP31 389 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 NPHS2Q9NP85 383 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 KLRF1Q9NZS2 232 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CALML5Q9NZT1 146 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 KLHL14Q9P2G3 628 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 SEC14L3Q9UDX4 400 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CHCHD2Q9Y6H1 151 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 PCSK5Q92824 1860 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 TNRC6AQ8NDV7 1962 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 RNF103-CHMP3A0A140T963 221 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 PRAMEF25A6NGN4 478 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 CCDC154A6NI56 674 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 SCDO00767 359 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 CCDC22O60826 627 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 WISP1O95388 367 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 C6orf47O95873 294 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 ALDOCP09972 364 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 PLA2G2AP14555 144 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 GABRA3P34903 492 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 PTGER4P35408 488 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 SOAT1P35610 550 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 KHKP50053 298 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 ARFIP2P53365 341 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 MLLT10P55197 1068 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 HBA1P69905 142 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 POU6F2P78424 691 aaPredicted RBP9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 PSG6Q00889 435 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 C17orf67Q0P5P2 114 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 FADDQ13158 208 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 RCAN2Q14206 197 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 GANABQ14697 944 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 SPANXN4Q5MJ08 99 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF468Q5VIY5 522 aaPredicted RBP9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 OR4F3Q6IEY1 312 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 ANKRD26P1Q6NSI1 321 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 C6orf120Q7Z4R8 191 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 MTERF4Q7Z6M4 381 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 OR1J4Q8NGS1 313 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 TMBIM1Q969X1 311 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 NEURL3Q96EH8 262 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 MAGED4Q96JG8 741 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 GPR137Q96N19 417 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 FRMD6Q96NE9 622 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 SH3GL1Q99961 368 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 OSBPL11Q9BXB4 747 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 TBL1XR1Q9BZK7 514 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 ARMC7Q9H6L4 198 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 ACKR4Q9NPB9 350 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 UBQLN4Q9NRR5 601 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 ASF1BQ9NVP2 202 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 GIMAP2Q9UG22 337 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 AP3M1Q9Y2T2 418 aa9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 MRPS18CQ9Y3D5 142 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 FASNP49327 2511 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-208ENST00000552890 POLEQ07864 2286 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 EVPLLA8MZ36 301 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 PRRG2O14669 202 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 BCKDKO14874 412 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 ANGPT2O15123 496 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 F10P00742 488 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 MATN1P21941 496 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 MAP3K8P41279 467 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 CASP3P42574 277 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 CDK9P50750 372 aaKnown RBP9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 UFM1P61960 85 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 PPIAP62937 165 aaKnown RBP9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 DUSP2Q05923 314 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 STX5Q13190 355 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 GAB1Q13480 694 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 LASP1Q14847 261 aaKnown RBP9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF385BQ569K4 471 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 COQ5Q5HYK3 327 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF324BQ6AW86 544 aaPredicted RBP9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 TIGD3Q6B0B8 471 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 FAM180BQ6P0A1 224 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 BLOC1S3Q6QNY0 202 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 LYPD8Q6UX82 237 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 GFRALQ6UXV0 394 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF621Q6ZSS3 439 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 C16orf62Q7Z3J2 963 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 MDGA2Q7Z553 956 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 CPLX4Q7Z7G2 160 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 PM20D2Q8IYS1 436 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 CPSF7Q8N684 471 aaKnown RBP9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 METTL25Q8N6Q8 603 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 OR10G3Q8NGC4 313 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 SARAFQ96BY9 339 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 SPDL1Q96EA4 605 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC35G5Q96KT7 338 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 PHF12Q96QT6 1004 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms