RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 CYCSP99999 105 aaKnown RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 IL9RQ01113 521 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 MAP2K1Q02750 393 aaPredicted RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CSTF1Q05048 431 aaKnown RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF177Q13360 481 aaPredicted RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CUL2Q13617 745 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 FHL1Q13642 323 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 KIAA0141Q14154 515 aaPredicted RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 FASTKQ14296 549 aaKnown RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 HLA-BQ31612 363 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CYBRD1Q53TN4 286 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 LINC00242Q5T6M2 205 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 STPG1Q5TH74 334 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 TAF3Q5VWG9 929 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 PWWP2BQ6NUJ5 590 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 BHLHB9Q6PI77 547 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ADAMTSL5Q6ZMM2 481 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 KIF6Q6ZMV9 814 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CYS1Q717R9 158 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 NOTCH2NLQ7Z3S9 236 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CTAGE6Q86UF2 777 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CCDC71Q8IV32 467 aaPredicted RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF781Q8N8C0 355 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 OR5D13Q8NGL4 314 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 C11orf45Q8TAV5 145 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 SPPL2AQ8TCT8 520 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 MRGPRDQ8TDS7 321 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 MYLPFQ96A32 169 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 BIRC7Q96CA5 298 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF501Q96CX3 271 aaPredicted RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 TPD52L3Q96J77 140 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CNOT6LQ96LI5 555 aaKnown RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 AMDHD1Q96NU7 426 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 PGLYRP2Q96PD5 576 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 F2RL3Q96RI0 385 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 TNFRSF13CQ96RJ3 184 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CCDC77Q9BR77 488 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 SLC30A2Q9BRI3 323 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 ANP32EQ9BTT0 268 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 CLEC7AQ9BXN2 247 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 RAB18Q9NP72 206 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 SMOXQ9NWM0 555 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 DUS2Q9NX74 493 aaKnown RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 UTP6Q9NYH9 597 aaKnown RBP3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 THYN1Q9P016 225 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 BAIAP2L1Q9UHR4 511 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 WDR45Q9Y484 360 aa3.38□□□□□ -1.87
LSM6P2-201ENST00000552208 IGLON5A6NGN9 336 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 RNF212BA8MTL3 300 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM72CH0Y354 149 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 TRAFD1O14545 582 aaPredicted RBP3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 PDE5AO76074 875 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 ANXA3P12429 323 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 AOC1P19801 751 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 ANOS1P23352 680 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 LAP3P28838 519 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 MMP12P39900 470 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 BRCC3P46736 316 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 POU3F4P49335 361 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 STK19P49842 368 aaPredicted RBP3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 PEX3P56589 373 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 OSTNP61366 133 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 RPL23AP62750 156 aaKnown RBP3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 ATXN7L3Q14CW9 347 aaPredicted RBP3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 CHI3L2Q15782 390 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 MAPK6Q16659 721 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM72AQ5TYM5 149 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 TMEM225Q6GV28 225 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM72DQ6L9T8 149 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 PRR5LQ6MZQ0 368 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 ZSCAN25Q6NSZ9 544 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM71F2Q6NXP2 309 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 STAC2Q6ZMT1 411 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 LANCL3Q6ZV70 420 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 KCNMB4Q86W47 210 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM72BQ86X60 149 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 UBQLNLQ8IYU4 475 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 SLC38A6Q8IZM9 456 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 C18orf25Q96B23 403 aaPredicted RBP3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 PELI1Q96FA3 418 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 SH3YL1Q96HL8 342 aaPredicted RBP3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 ELMO2Q96JJ3 720 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 TCEANC2Q96MN5 208 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 TGM7Q96PF1 710 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 NPAS2Q99743 824 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 TMEM121Q9BTD3 319 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 GPR61Q9BZJ8 451 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 PARLQ9H300 379 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 METTL7AQ9H8H3 244 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 B3GAT2Q9NPZ5 323 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 PLCXD1Q9NUJ7 323 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 UFSP2Q9NUQ7 469 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF446Q9NWS9 450 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 BARHL2Q9NY43 387 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 THAP10Q9P2Z0 257 aaPredicted RBP3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 GNG12Q9UBI6 72 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 EIF3KQ9UBQ5 218 aaKnown RBP3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 CIDEBQ9UHD4 219 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 CYTH4Q9UIA0 394 aa3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 ANAPC7Q9UJX3 599 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms