RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CXCL12P48061 93 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 FNTBP49356 437 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 NUDT6P53370 316 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 RGS8P57771 180 aaPredicted RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 EEF1A1P68104 462 aaKnown RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 LSM11P83369 360 aaKnown RBP eCLIP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 ALDH6A1Q02252 535 aaKnown RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 SRSF5Q13243 272 aaKnown RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 NDUFA9Q16795 377 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 DCST2Q5T1A1 773 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 C1orf94Q6P1W5 598 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 ZCCHC12Q6PEW1 402 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 CD300LDQ6UXZ3 194 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 CCDC81Q6ZN84 652 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 ZER1Q7Z7L7 766 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 LINC00471Q8N535 108 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 CDRT4Q8N9R6 151 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 OR6C4Q8NGE1 309 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 PIK3R3Q92569 461 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 GGHQ92820 318 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 PEX11GQ96HA9 241 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 TGM7Q96PF1 710 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 FUNDC2Q9BWH2 189 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 PRR14Q9BWN1 585 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 CHRNA10Q9GZZ6 450 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 DUSP15Q9H1R2 295 aaPredicted RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 C11orf16Q9NQ32 467 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 DUSP22Q9NRW4 184 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 FBXO34Q9NWN3 711 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 IMPAD1Q9NX62 359 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 EPHA6Q9UF33 1036 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 ENPP5Q9UJA9 477 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 SLC13A4Q9UKG4 626 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 CLCA2Q9UQC9 943 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 NTNG1Q9Y2I2 539 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 IFT52Q9Y366 437 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 LAMA3Q16787 3333 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 TRIOBPQ9H2D6 2365 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 PI4KAP42356 2102 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 A0A087WUU8 490 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 NPIPA5A0A0B4J1W7 369 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 A0A1B0GVT2 93 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 A0A1W2PPW3 197 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 GXYLT2A0PJZ3 443 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 CPSF4LA6NMK7 179 aaKnown RBP10.72□□□□□ -0.69
RAB5C-208ENST00000551338 NPIPA7E9PJI5 369 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 KIAA0513O60268 411 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 MAN1A2O60476 641 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 COQ9O75208 318 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 NTN1O95631 604 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 CDK1P06493 297 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 THBS1P07996 1170 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 GIMD1P0DJR0 217 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 NPIPA8P0DM63 369 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 S1PR1P21453 382 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 CTSKP43235 329 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 AVPR1BP47901 424 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF136P52737 540 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 C21orf59P57076 290 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 TAS2R41P59536 307 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 CDC42P60953 191 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 MAT1AQ00266 395 aaKnown RBP10.72□□□□□ -0.69
RAB5C-208ENST00000551338 MAP4K2Q12851 820 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF155Q12901 538 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-208ENST00000551338 AQP6Q13520 282 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 FAM53BQ14153 422 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 TRAM2Q15035 370 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 MAPK14Q16539 360 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 SYT16Q17RD7 645 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 SYT6Q5T7P8 510 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-208ENST00000551338 GARNL3Q5VVW2 1013 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 NKAIN2Q5VXU1 208 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 PLEKHM3Q6ZWE6 761 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 ANKRD13BQ86YJ7 626 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 VWA5B2Q8N398 1253 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 COX18Q8N8Q8 333 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 OR52R1Q8NGF1 315 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 ADAMTS18Q8TE60 1221 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 RAB2BQ8WUD1 216 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 RORBQ92753 470 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 YIPF6Q96EC8 236 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 CD180Q99467 661 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 MCHR1Q99705 422 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 GPA33Q99795 319 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 COPS4Q9BT78 406 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 DCUN1D5Q9BTE7 237 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 LMF2Q9BU23 707 aaKnown RBP10.72□□□□□ -0.69
RAB5C-208ENST00000551338 SPRTNQ9H040 489 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-208ENST00000551338 POLR2J3Q9H1A7 115 aaKnown RBP10.72□□□□□ -0.69
RAB5C-208ENST00000551338 ANKRD19PQ9H560 264 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 MTHFD2LQ9H903 347 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-208ENST00000551338 ACOT13Q9NPJ3 140 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 PRTFDC1Q9NRG1 225 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 SOHLH2Q9NX45 425 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 KLHL28Q9NXS3 571 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 SELENONQ9NZV5 590 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 KCNE5Q9UJ90 142 aa10.72□□□□□ -0.69
RAB5C-208ENST00000551338 HEMK1Q9Y5R4 338 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-208ENST00000551338 HYKKA2RU49 373 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms