RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 NDC1Q9BTX1 674 aa18.33■□□□□ 0.52
SSH1-209ENST00000551165 CNPPD1Q9BV87 410 aa18.33■□□□□ 0.52
SSH1-209ENST00000551165 NTNG1Q9Y2I2 539 aa18.33■□□□□ 0.52
SSH1-209ENST00000551165 ASCC3Q8N3C0 2202 aaKnown RBP18.33■□□□□ 0.52
SSH1-209ENST00000551165 GPR179Q6PRD1 2367 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 IGHV5-10-1A0A0J9YXX1 117 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 CPNE6O95741 557 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 GASTP01350 101 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 AGXTP21549 392 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 GSSP48637 474 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 HSD17B7P56937 341 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 ISL1P61371 349 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 HPCAP84074 193 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 PSG6Q00889 435 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 COLEC12Q5KU26 742 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 SLC23A3Q6PIS1 610 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 ARHGAP22Q7Z5H3 698 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 PRSS58Q8IYP2 241 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 ZBTB44Q8NCP5 570 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 GTPBP3Q969Y2 492 aaKnown RBP18.32■□□□□ 0.52
SSH1-209ENST00000551165 LRRN3Q9H3W5 708 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 ENAMQ9NRM1 1142 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 CALML5Q9NZT1 146 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 SERTAD3Q9UJW9 196 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 ERVK-19Q9WJR5 959 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 PEX12O00623 359 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 TIAF1O95411 115 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 IFNA16P05015 189 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 ELAVL4P26378 380 aaKnown RBP18.32■□□□□ 0.52
SSH1-209ENST00000551165 STT3AP46977 705 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 RFX3P48380 749 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 MFSD4BQ5TF39 518 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 KMT5CQ86Y97 462 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 NLGN4XQ8N0W4 816 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 PTCHD1Q96NR3 888 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 DPYSL5Q9BPU6 564 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 MRPS26Q9BYN8 205 aaKnown RBP18.32■□□□□ 0.52
SSH1-209ENST00000551165 ZNF350Q9GZX5 532 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 FOLH1BQ9HBA9 442 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 DUSP22Q9NRW4 184 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 ACAD8Q9UKU7 415 aa18.32■□□□□ 0.52
SSH1-209ENST00000551165 SLITRK5O94991 958 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 CCNB2O95067 398 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 AGR2O95994 175 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 TPD52P55327 224 aaPredicted RBP18.31■□□□□ 0.52
SSH1-209ENST00000551165 NPRL3Q12980 569 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 NNATQ16517 81 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 MINDY4Q4G0A6 757 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 ZNF770Q6IQ21 691 aaPredicted RBP18.31■□□□□ 0.52
SSH1-209ENST00000551165 LAPTM4BQ86VI4 370 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 ZNF321PQ8N8H1 164 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 SLC38A9Q8NBW4 561 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 CHDHQ8NE62 594 aaPredicted RBP18.31■□□□□ 0.52
SSH1-209ENST00000551165 IFI44Q8TCB0 444 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 SLC7A13Q8TCU3 470 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 ARSGQ96EG1 525 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 DHRS1Q96LJ7 313 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 ING2Q9H160 280 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 MTHFD2LQ9H903 347 aaPredicted RBP18.31■□□□□ 0.52
SSH1-209ENST00000551165 MAN2C1Q9NTJ4 1040 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 A8MUA0 341 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 OR6B1O95007 311 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 H1F0P07305 194 aaKnown RBP18.31■□□□□ 0.52
SSH1-209ENST00000551165 SQSTM1Q13501 440 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 ANGPT1Q15389 498 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 LAIR1Q6GTX8 287 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 TAGAPQ8N103 731 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 AQP11Q8NBQ7 271 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 CNIH3Q8TBE1 160 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 ADAMTS18Q8TE60 1221 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 ATOH1Q92858 354 aaPredicted RBP18.31■□□□□ 0.52
SSH1-209ENST00000551165 STACQ99469 402 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 ARHGDIGQ99819 225 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 ZNF443Q9Y2A4 671 aaPredicted RBP18.31■□□□□ 0.52
SSH1-209ENST00000551165 SLC9A8Q9Y2E8 581 aa18.31■□□□□ 0.52
SSH1-209ENST00000551165 HEMK1Q9Y5R4 338 aaPredicted RBP18.31■□□□□ 0.52
SSH1-209ENST00000551165 GDF9O60383 454 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 BCAS1O75363 584 aaPredicted RBP18.3■□□□□ 0.52
SSH1-209ENST00000551165 BMP10O95393 424 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 IGKV1D-16P01601 117 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 CBLP22681 906 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 TRHRP34981 398 aaPredicted RBP18.3■□□□□ 0.52
SSH1-209ENST00000551165 RPP38P78345 283 aaKnown RBP18.3■□□□□ 0.52
SSH1-209ENST00000551165 KCTD21Q4G0X4 260 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 NPSR1Q6W5P4 371 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 ZNF836Q6ZNA1 936 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 CEP76Q8TAP6 659 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 HOXB13Q92826 284 aaPredicted RBP18.3■□□□□ 0.52
SSH1-209ENST00000551165 CNDP2Q96KP4 475 aaKnown RBP18.3■□□□□ 0.52
SSH1-209ENST00000551165 CCDC74BQ96LY2 380 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 OR6C1Q96RD1 312 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 FUZQ9BT04 418 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 ZNF304Q9HCX3 659 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 PAPOLBQ9NRJ5 636 aaKnown RBP18.3■□□□□ 0.52
SSH1-209ENST00000551165 NDRG4Q9ULP0 352 aaKnown RBP18.3■□□□□ 0.52
SSH1-209ENST00000551165 HCN4Q9Y3Q4 1203 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 TRIM64A6NGJ6 449 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 AGAP5A6NIR3 686 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 NKX2-2O95096 273 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 CLPSP04118 112 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms