RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 HOXB13Q92826 284 aaPredicted RBP11.86□□□□□ -0.51
NPAS3-209ENST00000551008 GFM2Q969S9 779 aaKnown RBP11.86□□□□□ -0.51
NPAS3-209ENST00000551008 CIDECQ96AQ7 238 aaPredicted RBP11.86□□□□□ -0.51
NPAS3-209ENST00000551008 EFHD2Q96C19 240 aaPredicted RBP11.86□□□□□ -0.51
NPAS3-209ENST00000551008 ELP4Q96EB1 424 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 C14orf79Q96F83 325 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 ZNF764Q96H86 408 aaPredicted RBP11.86□□□□□ -0.51
NPAS3-209ENST00000551008 METTL2AQ96IZ6 378 aaKnown RBP11.86□□□□□ -0.51
NPAS3-209ENST00000551008 BBS4Q96RK4 519 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 ADOQ96SZ5 270 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 CCT7Q99832 543 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 TRMOQ9BU70 441 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 G6PC3Q9BUM1 346 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 TMEM109Q9BVC6 243 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 GIMAP4Q9NUV9 329 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 C1orf109Q9NX04 203 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 MID2Q9UJV3 735 aa11.86□□□□□ -0.51
NPAS3-209ENST00000551008 ABCA4P78363 2273 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 SLC28A1O00337 649 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 PIP5K1BO14986 540 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 ZNF500O60304 480 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-209ENST00000551008 NPHS1O60500 1241 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 SEC22BO75396 215 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 CRCPO75575 148 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 REM1O75628 298 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 TRAPPC6AO75865 159 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 EPPINO95925 133 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 IGKV1D-16P01601 117 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 GABRA1P14867 456 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 ELAVL4P26378 380 aaKnown RBP11.85□□□□□ -0.51
NPAS3-209ENST00000551008 MPIP34949 423 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 ZFP36L2P47974 494 aaKnown RBP11.85□□□□□ -0.51
NPAS3-209ENST00000551008 RPL38P63173 70 aaKnown RBP11.85□□□□□ -0.51
NPAS3-209ENST00000551008 RPP38P78345 283 aaKnown RBP11.85□□□□□ -0.51
NPAS3-209ENST00000551008 ZNF155Q12901 538 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-209ENST00000551008 ERCC6LQ2NKX8 1250 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 EMBQ6PCB8 327 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 PLXDC2Q6UX71 529 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 DMRTC2Q8IXT2 367 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-209ENST00000551008 LIX1Q8N485 282 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 MREGQ8N565 214 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 OR10Q1Q8NGQ4 319 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 OR1J4Q8NGS1 313 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 CLHC1Q8NHS4 586 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 NUDT8Q8WV74 236 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 TWIST2Q8WVJ9 160 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 C3orf30Q96M34 536 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 TSSK3Q96PN8 268 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 STMN4Q9H169 189 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-209ENST00000551008 KCNJ16Q9NPI9 418 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 MIEF1Q9NQG6 463 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 ALKBH4Q9NXW9 302 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 KLRF1Q9NZS2 232 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 BAIAP2L1Q9UHR4 511 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 WBP11Q9Y2W2 641 aaKnown RBP11.85□□□□□ -0.51
NPAS3-209ENST00000551008 WIF1Q9Y5W5 379 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 HIVEP1P15822 2718 aa11.85□□□□□ -0.51
NPAS3-209ENST00000551008 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 GXYLT2A0PJZ3 443 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 AKAP10O43572 662 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 FADS1O60427 444 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 TBX19O60806 448 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 SLU7O95391 586 aaKnown RBP11.84□□□□□ -0.51
NPAS3-209ENST00000551008 HOXD4P09016 255 aaPredicted RBP11.84□□□□□ -0.51
NPAS3-209ENST00000551008 IFI6P09912 130 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 BCKDHAP12694 445 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 GRK2P25098 689 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 ZNF136P52737 540 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 GFRA1P56159 465 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 B3GALT5-AS1P59052 145 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 ZNF844Q08AG5 666 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 GAB1Q13480 694 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 EXOSC6Q5RKV6 272 aaKnown RBP11.84□□□□□ -0.51
NPAS3-209ENST00000551008 OR5M10Q6IEU7 315 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 LARP4Q71RC2 724 aaKnown RBP eCLIP11.84□□□□□ -0.51
NPAS3-209ENST00000551008 ADGRE4PQ86SQ3 457 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 FADS6Q8N9I5 356 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 GIMAP5Q96F15 307 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 SH3GL2Q99962 352 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 LMF2Q9BU23 707 aaKnown RBP11.84□□□□□ -0.51
NPAS3-209ENST00000551008 ROPN1BQ9BZX4 212 aaPredicted RBP11.84□□□□□ -0.51
NPAS3-209ENST00000551008 ROPN1Q9HAT0 212 aaPredicted RBP11.84□□□□□ -0.51
NPAS3-209ENST00000551008 TAS2R9Q9NYW1 312 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 NTMQ9P121 344 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 L3MBTL1Q9Y468 752 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 TRAF6Q9Y4K3 522 aa11.84□□□□□ -0.51
NPAS3-209ENST00000551008 MBD3L4A6NDZ8 208 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-209ENST00000551008 MBD3L3A6NE82 208 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-209ENST00000551008 MBD3L5A6NJ08 208 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-209ENST00000551008 AHRRA9YTQ3 701 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 PDPK1O15530 556 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 RGS14O43566 566 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 ZIC3O60481 467 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 COQ9O75208 318 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 SLITRK5O94991 958 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 NEFHP12036 1026 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 EFNA1P20827 205 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-209ENST00000551008 SSTR2P30874 369 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 NTSP30990 170 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 EVI2BP34910 448 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms