RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 C18orf12Q96KH6 178 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 RCHY1Q96PM5 261 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 STRADBQ9C0K7 418 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 MOB1AQ9H8S9 216 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 SLC25A19Q9HC21 320 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 CNOT2Q9NZN8 540 aaKnown RBP4□□□□□ -1.77
LIMA1-205ENST00000550592 ENTPD4Q9Y227 616 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 NUDCQ9Y266 331 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 PRSS21Q9Y6M0 314 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 NCOR2Q9Y618 2525 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 CDH23Q9H251 3354 aa4□□□□□ -1.77
LIMA1-205ENST00000550592 IBTKQ9P2D0 1353 aaPredicted RBP4□□□□□ -1.77
LIMA1-205ENST00000550592 ERVV-1B6SEH8 477 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 PDHXO00330 501 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 RASGRF2O14827 1237 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 PDGFBP01127 241 aaPredicted RBP3.99□□□□□ -1.77
LIMA1-205ENST00000550592 GNSP15586 552 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 SLC6A8P48029 635 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 SLC1A6P48664 564 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 NDUFV3P56181 108 aaKnown RBP3.99□□□□□ -1.77
LIMA1-205ENST00000550592 PEX3P56589 373 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 RPS4XP62701 263 aaKnown RBP3.99□□□□□ -1.77
LIMA1-205ENST00000550592 CLPPQ16740 277 aaPredicted RBP3.99□□□□□ -1.77
LIMA1-205ENST00000550592 POM121L1PQ3SYA9 428 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 FAM182AQ5T1J6 154 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 DOK6Q6PKX4 331 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 FAM159AQ6UWV7 190 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 RBM43Q6ZSC3 357 aaKnown RBP3.99□□□□□ -1.77
LIMA1-205ENST00000550592 LMNTD2Q8IXW0 634 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 LRRC17Q8N6Y2 441 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 BANPQ8N9N5 519 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 ZNRF1Q8ND25 227 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 ICA1LQ8NDH6 482 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 OR1K1Q8NGR3 316 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 OR4F5Q8NH21 305 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 TMEM45BQ96B21 275 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 C14orf79Q96F83 325 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 SAMD8Q96LT4 415 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 ANKRD27Q96NW4 1050 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 ACCSQ96QU6 501 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 IWS1Q96ST2 819 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 LRRC61Q9BV99 259 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 TUBB1Q9H4B7 451 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 DCTPP1Q9H773 170 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 NT5DC2Q9H857 520 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 CTSZQ9UBR2 303 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 LHX3Q9UBR4 397 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 TUBGCP4Q9UGJ1 667 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 MUTYHQ9UIF7 546 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 RARRES3Q9UL19 164 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 MTF2Q9Y483 593 aaPredicted RBP3.99□□□□□ -1.77
LIMA1-205ENST00000550592 USP16Q9Y5T5 823 aa3.99□□□□□ -1.77
LIMA1-205ENST00000550592 PRRC2BQ5JSZ5 2229 aaKnown RBP3.99□□□□□ -1.77
LIMA1-205ENST00000550592 MAP1BP46821 2468 aaKnown RBP3.99□□□□□ -1.77
LIMA1-205ENST00000550592 MYO3BQ8WXR4 1341 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 NAV2Q8IVL1 2488 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 TRGV8A0A0C4DH27 118 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 A8MXK9 166 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 C19orf81C9J6K1 198 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 SH2D1BO14796 132 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 STAM2O75886 525 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 POP4O95707 220 aaKnown RBP3.98□□□□□ -1.77
LIMA1-205ENST00000550592 TGFAP01135 160 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 ZNF883P0CG24 379 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 RPA1P27694 616 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 MAT2AP31153 395 aaKnown RBP3.98□□□□□ -1.77
LIMA1-205ENST00000550592 AKT2P31751 481 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 CAPGP40121 348 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 ASMTP46597 345 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 SMC1AQ14683 1233 aaKnown RBP3.98□□□□□ -1.77
LIMA1-205ENST00000550592 HAGHQ16775 308 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 ZNF528Q3MIS6 628 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 MUC21Q5SSG8 566 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 STEAP1BQ6NZ63 245 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 METTL7BQ6UX53 244 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 ASRGL1Q7L266 308 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 NUFIP2Q7Z417 695 aaKnown RBP3.98□□□□□ -1.77
LIMA1-205ENST00000550592 RPAINQ86UA6 219 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 RNF130Q86XS8 419 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 ERO1BQ86YB8 467 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 ZNF440Q8IYI8 595 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 RNF148Q8N7C7 305 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 ZNF781Q8N8C0 355 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 RELL2Q8NC24 303 aaPredicted RBP3.98□□□□□ -1.77
LIMA1-205ENST00000550592 FBXO25Q8TCJ0 367 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 MIPOL1Q8TD10 442 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 DQX1Q8TE96 717 aaKnown RBP3.98□□□□□ -1.77
LIMA1-205ENST00000550592 TMEM37Q8WXS4 190 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 C16orf58Q96GQ5 468 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 KCNK16Q96T55 309 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 KRT23Q9C075 422 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 GFRA4Q9GZZ7 299 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 FAM124BQ9H5Z6 455 aaPredicted RBP3.98□□□□□ -1.77
LIMA1-205ENST00000550592 KLHDC2Q9Y2U9 406 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 SLC6A5Q9Y345 797 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 ATG4BQ9Y4P1 393 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 DOCK3Q8IZD9 2030 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 ROCK2O75116 1388 aaKnown RBP3.98□□□□□ -1.77
LIMA1-205ENST00000550592 SCN9AQ15858 1988 aa3.98□□□□□ -1.77
LIMA1-205ENST00000550592 SALL1Q9NSC2 1324 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms