RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 EQTNQ9NQ60 294 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 PNPLA3Q9NST1 481 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 ATAD3AQ9NVI7 634 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 ASIC5Q9NY37 505 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 NKIRAS1Q9NYS0 192 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 NOP53Q9NZM5 478 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 EIF3LQ9Y262 564 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 KLF2Q9Y5W3 355 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 NUP214P35658 2090 aaPredicted RBP15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 TTC36A6NLP5 189 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 CYSRT1A8MQ03 144 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 PRSS44E7EML9 344 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 GNB5O14775 395 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 SNPHO15079 494 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 ICOSLGO75144 302 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 PRPS1L1P21108 318 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 ENDOUP21128 410 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 COL8A1P27658 744 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 TRPC1P48995 793 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 CDK9P50750 372 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 SLC18A1P54219 525 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 PNLIPRP2P54317 469 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 BST1Q10588 318 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 CASP8Q14790 479 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 SMU1Q2TAY7 513 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 OR7A2PQ8NGA2 310 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 OR5M9Q8NGP3 310 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 MGARPQ8TDB4 240 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 EFHD2Q96C19 240 aaPredicted RBP15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 PPP1R36Q96LQ0 422 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 GNRHR2Q96P88 292 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 LMF2Q9BU23 707 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 C3orf14Q9HBI5 128 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 SPRR3Q9UBC9 169 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 TNFRSF10DQ9UBN6 386 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 ACAD8Q9UKU7 415 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 WIF1Q9Y5W5 379 aa15.75■□□□□ 0.11
CHMP1A-208ENST00000550102 C15orf38-AP3S2A0A0A6YYH1 394 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 WDR1O75083 606 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 TRAPPC6AO75865 159 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 HPNP05981 417 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 ACVR2AP27037 513 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 PTPN6P29350 595 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 DCTP40126 519 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 PTGDSP41222 190 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 WDR4P57081 412 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 EMX2Q04743 252 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 TOMM20Q15388 145 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 DECR1Q16698 335 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 VPS26BQ4G0F5 336 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 GXYLT1Q4G148 440 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 CPTPQ5TA50 214 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 TMEM211Q6ICI0 200 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 WDR53Q7Z5U6 358 aaPredicted RBP15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 MARVELD2Q8N4S9 558 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 OR4N2Q8NGD1 307 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 CEP70Q8NHQ1 597 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 DTNBP1Q96EV8 351 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 PRPF18Q99633 342 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 COQ3Q9NZJ6 369 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 NTMQ9P121 344 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 MRTO4Q9UKD2 239 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 CBLCQ9ULV8 474 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 MAPRE3Q9UPY8 281 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 HRH3Q9Y5N1 445 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 TEX15Q9BXT5 2789 aa15.74■□□□□ 0.11
CHMP1A-208ENST00000550102 LAMP1P11279 417 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 G6PDP11413 515 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 CYP4B1P13584 511 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 EFNA1P20827 205 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 PSMD4P55036 377 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 C21orf58P58505 322 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 PRR5P85299 388 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 MLC1Q15049 377 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 ZNF585AQ6P3V2 769 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 KRTCAP2Q8N6L1 136 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 NATD1Q8N6N6 113 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 CDRT4Q8N9R6 151 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 NUP43Q8NFH3 380 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 RAB3IL1Q8TBN0 382 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 RNF138Q8WVD3 245 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 HOXB13Q92826 284 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 AKTIPQ9H8T0 292 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 SERHLQ9NQF3 203 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 ABCG2Q9UNQ0 655 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 MED12Q93074 2177 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 NOTCH2Q04721 2471 aa15.73■□□□□ 0.11
CHMP1A-208ENST00000550102 A0A1W2PRB8 838 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 C2orf72A6NCS6 295 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 EMC8O43402 210 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 KCNH1O95259 989 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 CLDN14O95500 239 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 HTR1EP28566 365 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 EVI2BP34910 448 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 GCKP35557 465 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 PRKAG1P54619 331 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 ZNF787Q6DD87 383 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 MFSD12Q6NUT3 480 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 B3GNT6Q6ZMB0 384 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 ACAD11Q709F0 780 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms