RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CACYBPQ9HB71 228 aaKnown RBP16.13■□□□□ 0.17
LETMD1-220ENST00000549686 MMP25Q9NPA2 562 aa16.13■□□□□ 0.17
LETMD1-220ENST00000549686 DCAF13Q9NV06 445 aaKnown RBP16.13■□□□□ 0.17
LETMD1-220ENST00000549686 KLK13Q9UKR3 277 aa16.13■□□□□ 0.17
LETMD1-220ENST00000549686 OR10H1Q9Y4A9 318 aa16.13■□□□□ 0.17
LETMD1-220ENST00000549686 TCRBV3S1A0A5B6 114 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 FKBP6O75344 327 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 STX11O75558 287 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 C8BP07358 591 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 CT45A8P0DMV1 189 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 CT45A9P0DMV2 189 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 F8A1P23610 371 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 LCN1P31025 176 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 SOX11P35716 441 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 PIGAP37287 484 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 PSMD4P55036 377 aaKnown RBP16.12■□□□□ 0.17
LETMD1-220ENST00000549686 RNF4P78317 190 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 CCNIQ14094 377 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 SYPL1Q16563 259 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 CT45A2Q5DJT8 189 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 FAM69BQ5VUD6 431 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 CYP2R1Q6VVX0 501 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 MRGPREQ86SM8 312 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 C9orf40Q8IXQ3 194 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 ZNF321PQ8N8H1 164 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 ANKFN1Q8N957 763 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 OIT3Q8WWZ8 545 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 ADIPOR1Q96A54 375 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 SDF2Q99470 211 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 ZNF350Q9GZX5 532 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 ADPRHL2Q9NX46 363 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 CBLCQ9ULV8 474 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 WASF3Q9UPY6 502 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 MSRB2Q9Y3D2 182 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 KCNE3Q9Y6H6 103 aa16.12■□□□□ 0.17
LETMD1-220ENST00000549686 PIEZO1Q92508 2521 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 TRBV11-1A0A0K0K1C0 115 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 PRAMEF27A3QJZ7 478 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 H6PDO95479 791 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 ATP6V1C1P21283 382 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 MRPS22P82650 360 aaKnown RBP16.11■□□□□ 0.17
LETMD1-220ENST00000549686 FUT5Q11128 374 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 MAPK11Q15759 364 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 DECR1Q16698 335 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.11■□□□□ 0.17
LETMD1-220ENST00000549686 BTBD16Q32M84 506 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 LRRC23Q53EV4 343 aaPredicted RBP16.11■□□□□ 0.17
LETMD1-220ENST00000549686 AAGABQ6PD74 315 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 NPSR1Q6W5P4 371 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 WDR53Q7Z5U6 358 aaPredicted RBP16.11■□□□□ 0.17
LETMD1-220ENST00000549686 ZNF441Q8N8Z8 693 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 FAM110BQ8TC76 370 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 ELP5Q8TE02 316 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 LZICQ8WZA0 190 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 OTUB1Q96FW1 271 aaPredicted RBP16.11■□□□□ 0.17
LETMD1-220ENST00000549686 DUS3LQ96G46 650 aaKnown RBP16.11■□□□□ 0.17
LETMD1-220ENST00000549686 GAL3ST4Q96RP7 486 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 SCNM1Q9BWG6 230 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 UGT2B28Q9BY64 529 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 SAP130Q9H0E3 1048 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 MTHFD2LQ9H903 347 aaPredicted RBP16.11■□□□□ 0.17
LETMD1-220ENST00000549686 P4HTMQ9NXG6 502 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 ANGPTL2Q9UKU9 493 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 DTX4Q9Y2E6 619 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 WDR45Q9Y484 360 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 DSPPQ9NZW4 1301 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 AHCTF1Q8WYP5 2266 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 SCN2AQ99250 2005 aa16.11■□□□□ 0.17
LETMD1-220ENST00000549686 TCRBV5S2A0A599 114 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 ENTPD5O75356 428 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 NME6O75414 186 aaPredicted RBP16.1■□□□□ 0.17
LETMD1-220ENST00000549686 KCNK2O95069 426 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 SERPINA1P01009 418 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 CHRM4P08173 479 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 PSMA4P25789 261 aaKnown RBP16.1■□□□□ 0.17
LETMD1-220ENST00000549686 NRG3P56975 720 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 RIPK1Q13546 671 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 IRAK1BP1Q5VVH5 260 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 CBLL1Q75N03 491 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 EIF3MQ7L2H7 374 aaKnown RBP16.1■□□□□ 0.17
LETMD1-220ENST00000549686 TAGAPQ8N103 731 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 ZNF619Q8N2I2 560 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 SPPL2AQ8TCT8 520 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 SLC26A7Q8TE54 656 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 ADAMTS17Q8TE56 1095 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 PIK3R3Q92569 461 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 RMND5BQ96G75 393 aaPredicted RBP16.1■□□□□ 0.17
LETMD1-220ENST00000549686 DEFB126Q9BYW3 111 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 SLC38A1Q9H2H9 487 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 MAGIXQ9H6Y5 334 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 IL17BQ9UHF5 180 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 ZNF223Q9UK11 482 aaPredicted RBP16.1■□□□□ 0.17
LETMD1-220ENST00000549686 FBXL4Q9UKA2 621 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 IFT52Q9Y366 437 aa16.1■□□□□ 0.17
LETMD1-220ENST00000549686 GPC6Q9Y625 555 aaPredicted RBP16.1■□□□□ 0.17
LETMD1-220ENST00000549686 DHRS12A0PJE2 317 aa16.09■□□□□ 0.17
LETMD1-220ENST00000549686 GXYLT2A0PJZ3 443 aa16.09■□□□□ 0.17
LETMD1-220ENST00000549686 A8MUI8 341 aa16.09■□□□□ 0.17
LETMD1-220ENST00000549686 M0QX08 132 aa16.09■□□□□ 0.17
LETMD1-220ENST00000549686 SUV39H1O43463 412 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms