RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ANAPC10Q9UM13 185 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 VPS4AQ9UN37 437 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 EBAG9O00559 213 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 TNFRSF6BO95407 300 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ETHE1O95571 254 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 IL18BPO95998 194 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 IFNA14P01570 189 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 COX5BP10606 129 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 IFNGR1P15260 489 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ITGA2P17301 1181 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 FPR3P25089 353 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 UGT2B10P36537 528 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 EMDP50402 254 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF136P52737 540 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SLC12A2P55011 1212 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 H3F3AP84243 136 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 HSF2Q03933 536 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 KDSRQ06136 332 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 OLIG2Q13516 323 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 GPR18Q14330 331 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 KLK9Q2XQG4 91 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 LIN52Q52LA3 116 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ZMAT1Q5H9K5 638 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ABLIM2Q6H8Q1 611 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 FIGLAQ6QHK4 219 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 RNF111Q6ZNA4 994 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 CXorf67Q86X51 503 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 LYPD6Q86Y78 171 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 FAM109AQ8N4B1 249 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 TRIML2Q8N7C3 387 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 OR1N1Q8NGS0 311 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 STT3BQ8TCJ2 826 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SLC37A2Q8TED4 501 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SSC4DQ8WTU2 575 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 C10orf35Q96D05 121 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 RMDN1Q96DB5 314 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SPDL1Q96EA4 605 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 CATSPER2Q96P56 530 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ALPK1Q96QP1 1244 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 PRPF18Q99633 342 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SF3B5Q9BWJ5 86 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 RSPO3Q9BXY4 272 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 RBM38Q9H0Z9 239 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 UBQLN3Q9H347 655 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ALG9Q9H6U8 611 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 NOL11Q9H8H0 719 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SLC22A11Q9NSA0 550 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 NDUFA13Q9P0J0 144 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 KLK9Q9UKQ9 250 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 A0A0G2JK05 382 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 A0A1B0GTL3 188 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 GABRR3A8MPY1 467 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 HMGN4O00479 90 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 HCN1O60741 890 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SRSF10O75494 262 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SC5DO75845 299 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 PMS2P2O95744 297 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 AMY2AP04746 511 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ICAM2P13598 275 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 CPMP14384 443 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 AMY2BP19961 511 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 CCL1P22362 96 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 BDKRB1P46663 353 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 LMAN1P49257 510 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 MANFP55145 182 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 FOXA1P55317 472 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 RPP38P78345 283 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ATP1A4Q13733 1029 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 TESK1Q15569 626 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ZRANB3Q5FWF4 1079 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 LY6G6FQ5SQ64 297 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 UBE2UQ5VVX9 321 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 TFAP2CQ92754 450 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ZBTB8AQ96BR9 441 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SPACA9Q96E40 222 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 HRASLS5Q96KN8 279 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 PRRC1Q96M27 445 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ADAD1Q96M93 576 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ACAT2Q9BWD1 397 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 UGT2B28Q9BY64 529 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 CDIP1Q9H305 208 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 MRPS30Q9NP92 439 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 SLC35C2Q9NQQ7 365 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 BATF3Q9NR55 127 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 EIF2B4Q9UI10 523 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 TMEM5Q9Y2B1 443 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 TRPM6Q9BX84 2022 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 CDHR4A6H8M9 788 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 KLF7O75840 302 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 IFNB1P01574 187 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 DBIP07108 87 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 PROS1P07225 676 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 ME2P23368 584 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 MPZP25189 248 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 PRDX3P30048 256 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 MSMO1Q15800 293 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 C10orf128Q5T292 105 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 MBNL2Q5VZF2 373 aaKnown RBP4.52□□□□□ -1.69
SCAF11-212ENST00000549162 NANOGP8Q6NSW7 305 aa4.52□□□□□ -1.69
SCAF11-212ENST00000549162 B3GNT6Q6ZMB0 384 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms