RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PEX12O00623 359 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 DLGAP1O14490 977 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 AIFM1O95831 613 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 IFNA14P01570 189 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 NUDT7P0C024 238 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 ZNF23P17027 643 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 CERS1P27544 350 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 SSTR2P30874 369 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 PRIM2P49643 509 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 CHN2P52757 468 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 DSTNP60981 165 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 RAB8AP61006 207 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 SCARB2Q14108 478 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 ABHD13Q7L211 337 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 RNF130Q86XS8 419 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 ZDHHC21Q8IVQ6 265 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 SAMD14Q8IZD0 417 aaPredicted RBP18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 KCT2Q8NC54 265 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 OR5K1Q8NHB7 308 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 TFAP2CQ92754 450 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 RERGQ96A58 199 aaPredicted RBP18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 MACROD1Q9BQ69 325 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 SLX1AQ9BQ83 275 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 ANKRD60Q9BZ19 345 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 GLIPR2Q9H4G4 154 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 FANCEQ9HB96 536 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 A4GALTQ9NPC4 353 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 MS4A12Q9NXJ0 267 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 USE1Q9NZ43 259 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 CSAG2Q9Y5P2 127 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 CCDC88CQ9P219 2028 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 CNTRLQ7Z7A1 2325 aa18.56■□□□□ 0.56
CTDSP2-204ENST00000548823 A0A0J9YVX5 310 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 C9J4A7 227 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 GCM2O75603 506 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 KLF7O75840 302 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 ZNF682O95780 498 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 MT-ND1P03886 318 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 ZNF888P0CJ79 500 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 HOXB4P17483 251 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 BTN3A2P78410 334 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 CDK6Q00534 326 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 C6orf52Q5T4I8 152 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 ANGPTL8Q6UXH0 198 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 CARM1Q86X55 608 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 ZNF808Q8N4W9 903 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 N4BP2L2Q92802 583 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 BBS4Q96RK4 519 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 LYRM4Q9HD34 91 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 SEMA3GQ9NS98 782 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 GIMAP4Q9NUV9 329 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 SOHLH2Q9NX45 425 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 ANGPT4Q9Y264 503 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 SCN3AQ9NY46 2000 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 H0YGG7 62 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 PDLIM1O00151 329 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 EI24O14681 340 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 STATHP02808 62 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 CSNK2A2P19784 350 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 BUD31P41223 144 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 CCT3P49368 545 aaKnown RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 ALDH3A2P51648 485 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 PCBP3P57721 371 aaKnown RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 ARF3P61204 181 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 SELENOWP63302 87 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 DAG1Q14118 895 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 CYBRD1Q53TN4 286 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 B3GNTL1Q67FW5 361 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 BHLHB9Q6PI77 547 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 C6orf120Q7Z4R8 191 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 MRGPRGQ86SM5 289 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 PATL1Q86TB9 770 aaKnown RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 CDH24Q86UP0 819 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 ZDHHC13Q8IUH4 622 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 OR5AK3PQ8NH89 298 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 SDCCAG3Q96C92 435 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 MAPKAP1Q9BPZ7 522 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 DOHHQ9BU89 302 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 SMPD3Q9NY59 655 aaPredicted RBP18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 KCMF1Q9P0J7 381 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 FBXW2Q9UKT8 454 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 SLC22A7Q9Y694 548 aa18.55■□□□□ 0.56
CTDSP2-204ENST00000548823 FBN3Q75N90 2809 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 P2RX6O15547 441 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 B3GALT2O43825 422 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 JRKO75564 520 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 FABP3P05413 133 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 NR2F6P10588 404 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 ALOX12P18054 663 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 AGXTP21549 392 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 CDK9P50750 372 aaKnown RBP18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 ANXA11P50995 505 aaKnown RBP18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 CRYBA2P53672 197 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 ARSFP54793 590 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 TNFRSF17Q02223 184 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 MERTKQ12866 999 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 EPS8Q12929 822 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 TMEM214Q6NUQ4 689 aaKnown RBP18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 TMEM154Q6P9G4 183 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 HIPK1Q86Z02 1210 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms