RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CCDC151A5D8V7 595 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 TUBAL3A6NHL2 446 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 CLCA1A8K7I4 914 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 MYO1GB0I1T2 1018 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 ZNF708P17019 499 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 GRK2P25098 689 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 IL12BP29460 328 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 KRT20P35900 424 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 MC3RP41968 323 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 DGKQP52824 942 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 CLDN18P56856 261 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 PSG6Q00889 435 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 SRYQ05066 204 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 BTKQ06187 659 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 ZNF155Q12901 538 aaPredicted RBP15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 PAMR1Q6UXH9 720 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 ZYG11AQ6WRX3 759 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 KIF18BQ86Y91 864 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 OR4N2Q8NGD1 307 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 CDC26Q8NHZ8 85 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 ZFP3Q96NJ6 502 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 STMN4Q9H169 189 aaPredicted RBP15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 TBK1Q9UHD2 729 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 DKKL1Q9UK85 242 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 PLEKHA6Q9Y2H5 1048 aa15.78■□□□□ 0.12
CHMP1A-205ENST00000548650 COQ9O75208 318 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 PSMG1O95456 288 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 MPIP34949 423 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 STARP49675 285 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 PNLIPRP2P54317 469 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 OR5M10Q6IEU7 315 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 FRMD7Q6ZUT3 714 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 SLC44A2Q8IWA5 706 aaPredicted RBP15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 GSPT2Q8IYD1 628 aaKnown RBP15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 CCNYL1Q8N7R7 359 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 CEP112Q8N8E3 955 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 WNT2BQ93097 391 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 SFXN2Q96NB2 322 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 BBS4Q96RK4 519 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 TM9SF2Q99805 663 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 TMUB1Q9BVT8 246 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 MYNNQ9NPC7 610 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 GALNT8Q9NY28 637 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 TAS2R9Q9NYW1 312 aa15.77■□□□□ 0.12
CHMP1A-205ENST00000548650 MAP1AP78559 2803 aaPredicted RBP15.77■□□□□ 0.11
CHMP1A-205ENST00000548650 PCNX3Q9H6A9 2034 aa15.77■□□□□ 0.11
CHMP1A-205ENST00000548650 A0A087WV62 115 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 KIF2AO00139 706 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 PLOD2O00469 737 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 HCRTR2O43614 444 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 GLRA3O75311 464 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 SLITRK5O94991 958 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 RCBTB2O95199 551 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 PROCP04070 461 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 JUNP05412 331 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 MYL2P10916 166 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 EPXP11678 715 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 TCEA1P23193 301 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 EVI2BP34910 448 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 NCBP2P52298 156 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 B3GALT5-AS1P59052 145 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 SPDYAQ5MJ70 313 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 FAM71E1Q6IPT2 247 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 AAGABQ6PD74 315 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 TMEM107Q6UX40 140 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 SH2D5Q6ZV89 423 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 TGIF2LYQ8IUE0 185 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 GCNT2Q8N0V5 402 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 GOT1L1Q8NHS2 421 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 LINC01560Q8TB33 94 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 CCDC126Q96EE4 140 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 DTNBP1Q96EV8 351 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 TNFRSF12AQ9NP84 129 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 MIEF1Q9NQG6 463 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 DCDC2Q9UHG0 476 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 MRPS18CQ9Y3D5 142 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 OR10H1Q9Y4A9 318 aa15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 POLR3HQ9Y535 204 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-205ENST00000548650 A0A1W2PPM1 405 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 SCO2O43819 266 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 ZIC3O60481 467 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 RSL1D1O76021 490 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 CHMP24386 653 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 DPP4P27487 766 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 MRPS22P82650 360 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 C2orf80Q0P641 193 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 TRIM46Q7Z4K8 759 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 LUZP2Q86TE4 346 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 CNPY4Q8N129 248 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 OR2L13Q8N349 312 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 FADS6Q8N9I5 356 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 CHDHQ8NE62 594 aaPredicted RBP15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 KIF18AQ8NI77 898 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 INTS12Q96CB8 462 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 ALPK1Q96QP1 1244 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 RHOXF2Q9BQY4 288 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 RBM24Q9BX46 236 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 ACBD3Q9H3P7 528 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 TAS2R7Q9NYW3 318 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms