RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 DNAJA1P31689 397 aaKnown RBP11.29□□□□□ -0.6
GCN1-204ENST00000548132 EVI2BP34910 448 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 MAP3K8P41279 467 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 GSTM5P46439 218 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 CLDN15P56746 228 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 MYBPHQ13203 477 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 PDE7AQ13946 482 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 HEPACAMQ14CZ8 416 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 ERCC6LQ2NKX8 1250 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 EXOSC6Q5RKV6 272 aaKnown RBP11.29□□□□□ -0.6
GCN1-204ENST00000548132 KANK2Q63ZY3 851 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 ANKRD26P1Q6NSI1 321 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 NOXRED1Q6NXP6 359 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 ARSKQ6UWY0 536 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 RNF165Q6ZSG1 346 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 LARP4Q71RC2 724 aaKnown RBP eCLIP11.29□□□□□ -0.6
GCN1-204ENST00000548132 TMEM200AQ86VY9 491 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 PLCZ1Q86YW0 608 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 C10orf107Q8IVU9 208 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 PM20D2Q8IYS1 436 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 CLYBLQ8N0X4 340 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 RDH11Q8TC12 318 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 ABTB1Q969K4 478 aaPredicted RBP11.29□□□□□ -0.6
GCN1-204ENST00000548132 CCDC126Q96EE4 140 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 ZNF764Q96H86 408 aaPredicted RBP11.29□□□□□ -0.6
GCN1-204ENST00000548132 TRIB1Q96RU8 372 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 GPATCH1Q9BRR8 931 aaKnown RBP11.29□□□□□ -0.6
GCN1-204ENST00000548132 GATA5Q9BWX5 397 aaPredicted RBP11.29□□□□□ -0.6
GCN1-204ENST00000548132 LIME1Q9H400 295 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 ITGB1BP2Q9UKP3 347 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 PSME2Q9UL46 239 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 CBLCQ9ULV8 474 aa11.29□□□□□ -0.6
GCN1-204ENST00000548132 C19orf53Q9UNZ5 99 aaPredicted RBP11.29□□□□□ -0.6
GCN1-204ENST00000548132 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 A0A1W2PPR1 153 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 CLCA1A8K7I4 914 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 FAM47E-STBD1D6RA91 191 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 SYT5O00445 386 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 PLOD2O00469 737 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 DVL2O14641 736 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 ZIC3O60481 467 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 ABCB7O75027 752 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 REM1O75628 298 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 ACTL6AO96019 429 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 CHRNGP07510 517 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 IFI6P09912 130 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 CPN1P15169 458 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 CCKARP32238 428 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 FRKP42685 505 aaPredicted RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 STARP49675 285 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 NCBP2P52298 156 aaKnown RBP eCLIP11.28□□□□□ -0.6
GCN1-204ENST00000548132 AGFG1P52594 562 aaKnown RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 C2orf80Q0P641 193 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 CCDC153Q494R4 210 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 FLYWCH1Q4VC44 716 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 LIPMQ5VYY2 423 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 CES4AQ5XG92 561 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 OR5M10Q6IEU7 315 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 Q6ZSR9 355 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 IKBIPQ70UQ0 350 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 SLC44A2Q8IWA5 706 aaPredicted RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 SAMD14Q8IZD0 417 aaPredicted RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 FAM76AQ8TAV0 307 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 ZPLD1Q8TCW7 415 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 RNASE6Q93091 150 aaKnown RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 CIDECQ96AQ7 238 aaPredicted RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 GIMAP5Q96F15 307 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 APOPT1Q96IL0 206 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 LMF2Q9BU23 707 aaKnown RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 MECRQ9BV79 373 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 STMN4Q9H169 189 aaPredicted RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 GIMAP2Q9UG22 337 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 ZANQ9Y493 2812 aa11.28□□□□□ -0.6
GCN1-204ENST00000548132 NUP214P35658 2090 aaPredicted RBP11.28□□□□□ -0.6
GCN1-204ENST00000548132 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 GXYLT2A0PJZ3 443 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 COPEO14579 308 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 LSM1O15116 133 aaKnown RBP11.27□□□□□ -0.61
GCN1-204ENST00000548132 SCO2O43819 266 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 COQ9O75208 318 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 TNFSF13O75888 250 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 BCAS2O75934 225 aaPredicted RBP11.27□□□□□ -0.61
GCN1-204ENST00000548132 NUDT17P0C025 328 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 UROSP10746 265 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 CPA3P15088 417 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 KRT4P19013 534 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 TCEA1P23193 301 aaKnown RBP11.27□□□□□ -0.61
GCN1-204ENST00000548132 IL12BP29460 328 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 UQCRC1P31930 480 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 PNLIPRP2P54317 469 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 VSNL1P62760 191 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 EFR3AQ14156 821 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 TOMM20Q15388 145 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 UGT3A2Q3SY77 523 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 XKR7Q5GH72 579 aa11.27□□□□□ -0.61
GCN1-204ENST00000548132 SPDYAQ5MJ70 313 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms