RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 RORAP35398 523 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 MPLP40238 635 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 LIMS1P48059 325 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 NUP107P57740 925 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 ESRRGP62508 458 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 SNRPNP63162 240 aaKnown RBP12.52□□□□□ -0.41
PTCH1-215ENST00000547672 MAT1AQ00266 395 aaKnown RBP12.52□□□□□ -0.41
PTCH1-215ENST00000547672 MYBPC1Q00872 1141 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 IL1RL1Q01638 556 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 NPRL3Q12980 569 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 ELAVL1Q15717 326 aaKnown RBP12.52□□□□□ -0.41
PTCH1-215ENST00000547672 EXOC3L2Q2M3D2 409 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 CYP27C1Q4G0S4 372 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 PERM1Q5SV97 790 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 MFSD4BQ5TF39 518 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 TCTN3Q6NUS6 607 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 DEF8Q6ZN54 512 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 TMEM151BQ8IW70 566 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 CMIPQ8IY22 773 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 PARP8Q8N3A8 854 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 PLPP5Q8NEB5 264 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 HDAC2Q92769 488 aaKnown RBP12.52□□□□□ -0.41
PTCH1-215ENST00000547672 SLC38A4Q969I6 547 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 PRRC1Q96M27 445 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 MUS81Q96NY9 551 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 FEVQ99581 238 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 ARHGDIGQ99819 225 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 GABARAPL3Q9BY60 117 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 GRIP2Q9C0E4 1043 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 FOLH1BQ9HBA9 442 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-215ENST00000547672 VNN3Q9NY84 501 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 TMEFF2Q9UIK5 374 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF443Q9Y2A4 671 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-215ENST00000547672 GMPPBQ9Y5P6 360 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 MAGED1Q9Y5V3 778 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-215ENST00000547672 U3KQA8 63 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 SMIM31A0A1B0GVY4 71 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 OR6C76A6NM76 312 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 BRINP1O60477 761 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 MPZL2O60487 215 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 FMO6PO60774 539 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 MED26O95402 600 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 CBX7O95931 251 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 ONECUT2O95948 504 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 CD63P08962 238 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 GSTM3P21266 225 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 AGXTP21549 392 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 EMDP50402 254 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 PDX1P52945 283 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 TAS2R41P59536 307 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 CXCR4P61073 352 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 BTG2P78543 158 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 FUT5Q11128 374 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 EXOSC7Q15024 291 aaKnown RBP12.51□□□□□ -0.41
PTCH1-215ENST00000547672 TRAM2Q15035 370 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 FGD3Q5JSP0 725 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 RNF220Q5VTB9 566 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF691Q5VV52 312 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 TYW3Q6IPR3 259 aaKnown RBP12.51□□□□□ -0.41
PTCH1-215ENST00000547672 FRRS1Q6ZNA5 592 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 TSEN54Q7Z6J9 526 aaKnown RBP12.51□□□□□ -0.41
PTCH1-215ENST00000547672 PPP1R3BQ86XI6 285 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 SLITRK4Q8IW52 837 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 HS3ST5Q8IZT8 346 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 MORN4Q8NDC4 146 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 AGBL5Q8NDL9 886 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 VANGL1Q8TAA9 524 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-215ENST00000547672 FBXL20Q96IG2 436 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 MBOAT4Q96T53 435 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 CNPPD1Q9BV87 410 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 OR10A5Q9H207 317 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 RIBC2Q9H4K1 309 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 LANCL2Q9NS86 450 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 SCN3BQ9NY72 215 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 TMEM9Q9P0T7 183 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 OR10H1Q9Y4A9 318 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 KCNE3Q9Y6H6 103 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 MAU2Q9Y6X3 613 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 TECTAO75443 2155 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 EYSQ5T1H1 3165 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
PTCH1-215ENST00000547672 A0A1W2PQM1 296 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 C17orf105B2RV13 164 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 POLR1CO15160 346 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 KIAA0513O60268 411 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 MRPS14O60783 128 aaKnown RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 SMNDC1O75940 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 OR5F1O95221 314 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 GNAO1P09471 354 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 MYF5P13349 255 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 NID1P14543 1247 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 TNFRSF1BP20333 461 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 MAOAP21397 527 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 RPS4Y1P22090 263 aaKnown RBP12.5□□□□□ -0.41
PTCH1-215ENST00000547672 TTKP33981 857 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 PTGER1P34995 402 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 PPICP45877 212 aa12.5□□□□□ -0.41
PTCH1-215ENST00000547672 YAP1P46937 504 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms