RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 KLF11O14901 512 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ALOX15BO15296 676 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 STX7O15400 261 aaKnown RBP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 P2RX6O15547 441 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF264O43296 627 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 OR1F1O43749 312 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 NEBLO76041 1014 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 FGF19O95750 216 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 HPRP00739 348 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 SERPINB2P05120 415 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 TROVE2P10155 538 aaKnown RBP eCLIP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 DAOP14920 347 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 SSR1P43307 286 aaKnown RBP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 NDST1P52848 882 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 OR1D5P58170 312 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 HAND2P61296 217 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 RPS4XP62701 263 aaKnown RBP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 NAAAQ02083 359 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 MAP2K1Q02750 393 aaPredicted RBP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 MESDQ14696 234 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ARHGAP19Q14CB8 494 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 EXT1Q16394 746 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 MAPK6Q16659 721 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 DUSP5Q16690 384 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 HADHQ16836 314 aaKnown RBP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 RFTN2Q52LD8 501 aaPredicted RBP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 DCAF12Q5T6F0 453 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 DMKNQ6E0U4 476 aaPredicted RBP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 PYHIN1Q6K0P9 492 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF730Q6ZMV8 503 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 Q71RC1 249 aaPredicted RBP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ANO5Q75V66 913 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 CACUL1Q86Y37 369 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 LINC00518Q8N0U6 118 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 NIPA2Q8N8Q9 360 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF441Q8N8Z8 693 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ICA1LQ8NDH6 482 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 OR5D13Q8NGL4 314 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 OLIG1Q8TAK6 271 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 SLC22A8Q8TCC7 542 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 GIMAP1Q8WWP7 306 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 STARD8Q92502 1023 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ELMO2Q96JJ3 720 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 C10orf90Q96M02 699 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 EPYCQ99645 322 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 NUP58Q9BVL2 599 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 MED20Q9H944 212 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 LRRC4Q9HBW1 653 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 IKZF3Q9UKT9 509 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 KIAA1257Q9ULG3 409 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 FAF1Q9UNN5 650 aaPredicted RBP3.72□□□□□ -1.81
SCAF11-210ENST00000547654 PIGLQ9Y2B2 252 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 IFT52Q9Y366 437 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 MAD1L1Q9Y6D9 718 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 NOTCH3Q9UM47 2321 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF518AQ6AHZ1 1483 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 MAST1Q9Y2H9 1570 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 MYOM1P52179 1685 aa3.71□□□□□ -1.81
SCAF11-210ENST00000547654 SCAPERQ9BY12 1400 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 IGHV4OR15-8A0A075B7B6 117 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 TRAV26-1A0A087WT03 109 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 A0A087WUV0 522 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-210ENST00000547654 IGLV9-49A0A0B4J1Y8 123 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 HEATR9A2RTY3 570 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 SHISA7A6NL88 538 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 TMCO5BA8MYB1 307 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 DNALI1O14645 258 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-210ENST00000547654 FCMRO60667 390 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 NXPH2O95156 264 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 FCER2P06734 321 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 F7P08709 466 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-210ENST00000547654 CPN1P15169 458 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 FOSL2P15408 326 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 MX1P20591 662 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 FEN1P39748 380 aaKnown RBP3.71□□□□□ -1.82
SCAF11-210ENST00000547654 SYKP43405 635 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 FNTAP49354 379 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 FHITP49789 147 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 SGSHP51688 502 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 TGM3Q08188 693 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 LINC01620Q4KN68 170 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 XKR6Q5GH73 641 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 BEND6Q5SZJ8 279 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-210ENST00000547654 CARD17Q5XLA6 110 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 STEAP1BQ6NZ63 245 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 TRIM65Q6PJ69 517 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 DOK6Q6PKX4 331 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 TMEM207Q6UWW9 146 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 UNQ6126/PRO20091Q6UXV3 157 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 TRPM8Q7Z2W7 1104 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 PAQR7Q86WK9 346 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 ECHDC2Q86YB7 292 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 TGIF2LXQ8IUE1 241 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 PSTKQ8IV42 348 aaKnown RBP3.71□□□□□ -1.82
SCAF11-210ENST00000547654 VSTM4Q8IW00 320 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 KIRREL3Q8IZU9 778 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 ARL14Q8N4G2 192 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 STXBP6Q8NFX7 210 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 C8orf46Q8TAG6 207 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 LNX1Q8TBB1 728 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms