RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 UPK1AO00322 258 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 NPHS1O60500 1241 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 IL2RAP01589 272 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 CPN1P15169 458 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 TACR1P25103 407 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 ALDH3A1P30838 453 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 MC3RP41968 323 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 KANK2Q63ZY3 851 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 WDR93Q6P2C0 686 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 TMEM107Q6UX40 140 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 YRDCQ86U90 279 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 AENQ8WTP8 325 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 FAM111AQ96PZ2 611 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 TUBB1Q9H4B7 451 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 CALHM2Q9HA72 323 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 EML4Q9HC35 981 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 DDX18Q9NVP1 670 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 ZNF629Q9UEG4 869 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 CAMK2AQ9UQM7 478 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 TMED5Q9Y3A6 229 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 PTGDR2Q9Y5Y4 395 aa16.98■□□□□ 0.31
CHMP1A-203ENST00000547614 TTC36A6NLP5 189 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 DVL2O14641 736 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 TBX19O60806 448 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 SRD5A2P31213 254 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 ZNF155Q12901 538 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 ENPP6Q6UWR7 440 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 WDR53Q7Z5U6 358 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 TNIP2Q8NFZ5 429 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 OR4N2Q8NGD1 307 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 OR2T11Q8NH01 316 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 OR14L1PQ8NHC6 308 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 ZPLD1Q8TCW7 415 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 TRAF6Q9Y4K3 522 aa16.97■□□□□ 0.31
CHMP1A-203ENST00000547614 CSMD2Q7Z408 3487 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 SYT5O00445 386 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 LINC00032P0C843 101 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 PEX19P40855 299 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 GAS1P54826 345 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 KRTAP10-9P60411 292 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 RCAN2Q14206 197 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 ZNHIT3Q15649 155 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 UGT3A2Q3SY77 523 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 RFTN2Q52LD8 501 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 ARL13AQ5H913 290 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 DCST1Q5T197 706 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 NAXEQ8NCW5 288 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 TCP10LQ8TDR4 215 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 CAVIN3Q969G5 261 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 EFHD2Q96C19 240 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 TMEM109Q9BVC6 243 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 REEP4Q9H6H4 257 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 Q9N2J8 555 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 TAS2R10Q9NYW0 307 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 SLC17A7Q9P2U7 560 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 MRTO4Q9UKD2 239 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 FIS1Q9Y3D6 152 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 POLQO75417 2590 aa16.96■□□□□ 0.31
CHMP1A-203ENST00000547614 OTOGQ6ZRI0 2925 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 MBD3L4A6NDZ8 208 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 MBD3L3A6NE82 208 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 MBD3L5A6NJ08 208 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 LSM1O15116 133 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 PDPK1O15530 556 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 CHRNGP07510 517 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 CYP4B1P13584 511 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 SDC1P18827 310 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 GRK2P25098 689 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 SERPINB5P36952 375 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 GFRA1P56159 465 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 DLX5P56178 289 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 GAB1Q13480 694 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 DECR1Q16698 335 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 FBXL19-AS1Q494R0 122 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 CES4AQ5XG92 561 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 POMZP3Q6PJE2 187 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 IFNEQ86WN2 208 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 TRIM42Q8IWZ5 723 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 ZFP28Q8NHY6 868 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 MBD3L2Q8NHZ7 208 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 GFM2Q969S9 779 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 PPCDCQ96CD2 204 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 MTERF3Q96E29 417 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 ZBED6CLQ96FA7 236 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 LRRC46Q96FV0 321 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 ZNF559Q9BR84 538 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 LMF2Q9BU23 707 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 MECRQ9BV79 373 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 FBXL2Q9UKC9 423 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 CBLCQ9ULV8 474 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 ABCG2Q9UNQ0 655 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 MED12Q93074 2177 aa16.95■□□□□ 0.3
CHMP1A-203ENST00000547614 KDM4EB2RXH2 506 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 FADS1O60427 444 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 SPAG7O75391 227 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 SLU7O95391 586 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 BMP5P22003 454 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 CHMP24386 653 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 EVI2BP34910 448 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 FRKP42685 505 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms