RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 BBS10Q8TAM1 723 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 FIG4Q92562 907 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 MAL2Q969L2 176 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 ADIPOR1Q96A54 375 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 TMEM19Q96HH6 336 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 ZNF607Q96SK3 696 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 MESP1Q9BRJ9 268 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 SPATA5L1Q9BVQ7 753 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 CCDC86Q9H6F5 360 aaKnown RBP14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 TRIM45Q9H8W5 580 aaPredicted RBP14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 GORASP2Q9H8Y8 452 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 BCL2L10Q9HD36 194 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 EGFL7Q9UHF1 273 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 ANGPTL2Q9UKU9 493 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 CBLCQ9ULV8 474 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 DTX4Q9Y2E6 619 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 SPEGQ15772 3267 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 CDC14CA4D256 554 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 ANKRD65E5RJM6 399 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 ARPC2O15144 300 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 STX11O75558 287 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 ATP6V1C1P21283 382 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 LCN1P31025 176 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 KRT20P35900 424 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 PIGAP37287 484 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 POLE2P56282 527 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 CORO7P57737 925 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 MRPS22P82650 360 aaKnown RBP14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 AIMP2Q13155 320 aaKnown RBP14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 ELOAQ14241 798 aaKnown RBP14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 LCN8Q6JVE9 175 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 WDR53Q7Z5U6 358 aaPredicted RBP14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 SLC5A8Q8N695 610 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 SLC15A4Q8N697 577 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 ZNF441Q8N8Z8 693 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 TMEM102Q8N9M5 508 aaPredicted RBP14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 CLEC1AQ8NC01 280 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 FAM13CQ8NE31 585 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 SLC22A8Q8TCC7 542 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 FAM162AQ96A26 154 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 RMND5BQ96G75 393 aaPredicted RBP14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 NSMCE2Q96MF7 247 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 RNF145Q96MT1 663 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 CCNL2Q96S94 520 aaPredicted RBP14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 PCDHAC1Q9H158 963 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 NXF5Q9H1B4 397 aaKnown RBP14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 ATP13A2Q9NQ11 1180 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 ZNF223Q9UK11 482 aaPredicted RBP14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 KCNE3Q9Y6H6 103 aa14.66□□□□□ -0.06
TRAFD1-203ENST00000547063 AQP12BA6NM10 295 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 H0YHG0 523 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 ACOT8O14734 319 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 KLK10O43240 276 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 NME6O75414 186 aaPredicted RBP14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 SERPINB7O75635 380 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 KCNK2O95069 426 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 PGM3O95394 542 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 H6PDO95479 791 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 ETS2P15036 469 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 KDELR2P33947 212 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 MSX2P35548 267 aaPredicted RBP14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 TMED10P49755 219 aaKnown RBP14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 NR0B1P51843 470 aaKnown RBP14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 MS4A2Q01362 244 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 CHAF1BQ13112 559 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 SYPL1Q16563 259 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 CRB2Q5IJ48 1285 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 DCAF10Q5QP82 559 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 IRAK1BP1Q5VVH5 260 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 AP1ARQ63HQ0 302 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 NPSR1Q6W5P4 371 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 CCDC80Q76M96 950 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 AQP12AQ8IXF9 295 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 SLC34A3Q8N130 599 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 EID3Q8N140 333 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 ANKFN1Q8N957 763 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 GOLM1Q8NBJ4 401 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 RASSF5Q8WWW0 418 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 OIT3Q8WWZ8 545 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 PIK3R3Q92569 461 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 OTUB1Q96FW1 271 aaPredicted RBP14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 SDF2Q99470 211 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 TREX2Q9BQ50 279 aaPredicted RBP14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 MTHFD2LQ9H903 347 aaPredicted RBP14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 GMPR2Q9P2T1 348 aaKnown RBP14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 MYOTQ9UBF9 498 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 RPS6KA6Q9UK32 745 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 USP22Q9UPT9 525 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 POLHQ9Y253 713 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 WDR45Q9Y484 360 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 CFAP54Q96N23 3096 aa14.65□□□□□ -0.06
TRAFD1-203ENST00000547063 RRP8O43159 456 aaKnown RBP14.64□□□□□ -0.07
TRAFD1-203ENST00000547063 SORBS2O94875 1100 aaKnown RBP14.64□□□□□ -0.07
TRAFD1-203ENST00000547063 NAGAP17050 411 aa14.64□□□□□ -0.07
TRAFD1-203ENST00000547063 HOXB6P17509 224 aaKnown RBP14.64□□□□□ -0.07
TRAFD1-203ENST00000547063 SOX11P35716 441 aa14.64□□□□□ -0.07
TRAFD1-203ENST00000547063 PCBP3P57721 371 aaKnown RBP14.64□□□□□ -0.07
TRAFD1-203ENST00000547063 FUT5Q11128 374 aa14.64□□□□□ -0.07
TRAFD1-203ENST00000547063 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.64□□□□□ -0.07
TRAFD1-203ENST00000547063 ARMC10Q8N2F6 343 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms