RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 PDE7AQ13946 482 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 TRPM8Q7Z2W7 1104 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 TMEM179BQ7Z7N9 219 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 UNC45BQ8IWX7 931 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 MLKLQ8NB16 471 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 TMEM37Q8WXS4 190 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 DLX4Q92988 240 aaPredicted RBP2.43□□□□□ -2.02
CCDC38-204ENST00000546816 DHTKD1Q96HY7 919 aaPredicted RBP2.43□□□□□ -2.02
CCDC38-204ENST00000546816 TBX15Q96SF7 602 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 TSPAN18Q96SJ8 248 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 NAP1L3Q99457 506 aaPredicted RBP2.43□□□□□ -2.02
CCDC38-204ENST00000546816 TM2D1Q9BX74 207 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 TSSK1BQ9BXA7 367 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 ZNF331Q9NQX6 463 aaPredicted RBP2.43□□□□□ -2.02
CCDC38-204ENST00000546816 LHX3Q9UBR4 397 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 MAGEB4O15481 346 aaPredicted RBP2.42□□□□□ -2.02
CCDC38-204ENST00000546816 RAMP1O60894 148 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 ATP6V1G1O75348 118 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 VDRP11473 427 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 AREGP15514 252 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 UGT1A3P35503 534 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 SLC26A2P50443 739 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 SMSP52788 366 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 CASP9P55211 416 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 LRRC63Q05C16 580 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 NPRL3Q12980 569 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 ORC2Q13416 577 aaPredicted RBP2.42□□□□□ -2.02
CCDC38-204ENST00000546816 SLC39A12Q504Y0 691 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 LGSNQ5TDP6 509 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 PRR5LQ6MZQ0 368 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 UFSP1Q6NVU6 142 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 ZNF410Q86VK4 478 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 LHX4Q969G2 390 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 MARC2Q969Z3 335 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 DNAJA3Q96EY1 480 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 C11orf24Q96F05 449 aaPredicted RBP2.42□□□□□ -2.02
CCDC38-204ENST00000546816 VMP1Q96GC9 406 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 RTBDNQ9BSG5 229 aaPredicted RBP2.42□□□□□ -2.02
CCDC38-204ENST00000546816 ALG9Q9H6U8 611 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 PRMT8Q9NR22 394 aaPredicted RBP2.42□□□□□ -2.02
CCDC38-204ENST00000546816 CYTL1Q9NRR1 136 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 HMG20BQ9P0W2 317 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 TRMT6Q9UJA5 497 aaKnown RBP2.42□□□□□ -2.02
CCDC38-204ENST00000546816 ZNF175Q9Y473 711 aa2.42□□□□□ -2.02
CCDC38-204ENST00000546816 TRBV2A0A0J9YWF9 115 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 LRIT2A6NDA9 550 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 C5orf51A6NDU8 294 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 MAGEA4P43358 317 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 PPOXP50336 477 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 CAV2P51636 162 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 IL18R1Q13478 541 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 EIF2B1Q14232 305 aaKnown RBP2.41□□□□□ -2.02
CCDC38-204ENST00000546816 CAMK4Q16566 473 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 C2orf76Q3KRA6 126 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 ACSF3Q4G176 576 aaPredicted RBP2.41□□□□□ -2.02
CCDC38-204ENST00000546816 MEDAGQ5VYS4 303 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 DPY19L2P2Q6ZN68 376 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 TSEN54Q7Z6J9 526 aaKnown RBP2.41□□□□□ -2.02
CCDC38-204ENST00000546816 OR10H4Q8NGA5 316 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 OR52J3Q8NH60 311 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 FBXO30Q8TB52 745 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 RNASE8Q8TDE3 154 aaKnown RBP2.41□□□□□ -2.02
CCDC38-204ENST00000546816 HOMER3Q9NSC5 361 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 TRIM10Q9UDY6 481 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 GRIN2DO15399 1336 aa2.41□□□□□ -2.02
CCDC38-204ENST00000546816 IGLV3-16A0A075B6K0 115 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 A0A1W2PRV1 198 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 TOXO94900 526 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 SYNGR4O95473 234 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 CYP11B1P15538 503 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 ACVR1BP36896 505 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 RBMXP38159 391 aaKnown RBP2.4□□□□□ -2.03
CCDC38-204ENST00000546816 NPY2RP49146 381 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 STK19P49842 368 aaPredicted RBP2.4□□□□□ -2.03
CCDC38-204ENST00000546816 NME5P56597 212 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 PUDPQ08623 228 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 NME3Q13232 169 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 PKN2Q16513 984 aaKnown RBP2.4□□□□□ -2.03
CCDC38-204ENST00000546816 CLPPQ16740 277 aaPredicted RBP2.4□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF674Q2M3X9 581 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 OLFM4Q6UX06 510 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 DLEU7Q6UYE1 221 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 VPS36Q86VN1 386 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 MCOLN2Q8IZK6 566 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 BBS1Q8NFJ9 593 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 OR4F17Q8NGA8 305 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 ATP6V1E2Q96A05 226 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 OR4F4Q96R69 305 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 CARD9Q9H257 536 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 MEPEQ9NQ76 525 aaPredicted RBP2.4□□□□□ -2.03
CCDC38-204ENST00000546816 MBD2Q9UBB5 411 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 MIOXQ9UGB7 285 aa2.4□□□□□ -2.03
CCDC38-204ENST00000546816 BARX2Q9UMQ3 279 aaPredicted RBP2.4□□□□□ -2.03
CCDC38-204ENST00000546816 A0A0J9YVX5 310 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 SMIM30A4D0T7 59 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 STK17BO94768 372 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 PNPP00491 289 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 PGK1P00558 417 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 HPNP05981 417 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 RPS2P15880 293 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms