RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RGS8P57771 180 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 KHDRBS2Q5VWX1 349 aaKnown RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 METAP1DQ6UB28 335 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 ARL14Q8N4G2 192 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 C9orf43Q8TAL5 461 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 SLC25A46Q96AG3 418 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 SLC35G5Q96KT7 338 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 SAMD8Q96LT4 415 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 RBCK1Q9BYM8 510 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 THSD1Q9NS62 852 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 RDH8Q9NYR8 311 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 FBXL4Q9UKA2 621 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 CORO2BQ9UQ03 480 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 GPR55Q9Y2T6 319 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 CHST2Q9Y4C5 530 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 OR1A2Q9Y585 309 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 PCDHGB2Q9Y5G2 931 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 PCYT1BQ9Y5K3 369 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 FNDC1Q4ZHG4 1894 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 FRMPD3Q5JV73 1810 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 HYKKA2RU49 373 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 ERI3O43414 337 aaKnown RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 RAD1O60671 282 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 GABRB1P18505 474 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 DDCP20711 480 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 PPIBP23284 216 aaKnown RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 BTN1A1Q13410 526 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 SHHQ15465 462 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 ZNF630Q2M218 657 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 PRAMEF14Q5SWL7 426 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 PRAMEF13Q5VWM6 474 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 LUZP2Q86TE4 346 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 OR4C15Q8NGM1 316 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 ECHDC3Q96DC8 303 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 ZNF607Q96SK3 696 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 MS4A7Q9GZW8 240 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 C6orf106Q9H6K1 298 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 RDH14Q9HBH5 336 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 USP36Q9P275 1121 aaKnown RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 MGAT4BQ9UQ53 548 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 MRPS23Q9Y3D9 190 aaKnown RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 SPTBN5Q9NRC6 3674 aaKnown RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 BRWD1Q9NSI6 2320 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 TRIOBPQ9H2D6 2365 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 H3BUI4 141 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 LGALS8O00214 317 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 HMGN2P05204 90 aaKnown RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 C1GALT1C1LP0DN25 315 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 CLCNKAP51800 687 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 GPM6BQ13491 265 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 NTRK2Q16620 822 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 ZNF311Q5JNZ3 666 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 GRHL2Q6ISB3 625 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 C17orf64Q86WR6 236 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 OR4M1Q8NGD0 313 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 COQ8AQ8NI60 647 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 GLYATL1Q969I3 302 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 MS4A3Q96HJ5 214 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 DPH1Q9BZG8 443 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 OR10A4Q9H209 315 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 SLC28A3Q9HAS3 691 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 C12orf4Q9NQ89 552 aa13.79□□□□□ -0.2
HOXC11-202ENST00000546378 SPATA6Q9NWH7 488 aaPredicted RBP13.79□□□□□ -0.2
HOXC11-202ENST00000546378 GABRPO00591 440 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 PGRMC2O15173 223 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 NARSO43776 548 aaKnown RBP13.78□□□□□ -0.2
HOXC11-202ENST00000546378 FCMRO60667 390 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 KDM4BO94953 1096 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 ACP5P13686 325 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 PYCR1P32322 319 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 PTGS2P35354 604 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 ATP12AP54707 1039 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 TAP2Q03519 686 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 ANGPT1Q15389 498 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 TOR2AQ5JU69 321 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 FAM109AQ8N4B1 249 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 CHTF18Q8WVB6 975 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 SEMA4CQ9C0C4 833 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 SLC25A18Q9H1K4 315 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 ADAP2Q9NPF8 381 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 BRD7Q9NPI1 651 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 MYEF2Q9P2K5 600 aaKnown RBP13.78□□□□□ -0.2
HOXC11-202ENST00000546378 AK6Q9Y3D8 172 aaKnown RBP13.78□□□□□ -0.2
HOXC11-202ENST00000546378 LOC100509620A0A075B734 347 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 A0A0A6YYJ9 748 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 A0A1B0GVT2 93 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 PLPP1O14494 284 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 TMPRSS11DO60235 418 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 RPP14O95059 124 aaKnown RBP13.78□□□□□ -0.2
HOXC11-202ENST00000546378 EFEMP2O95967 443 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 TBXA2RP21731 343 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 SOX9P48436 509 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 FNTBP49356 437 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 HTRA4P83105 476 aaPredicted RBP13.78□□□□□ -0.2
HOXC11-202ENST00000546378 C6orf132Q5T0Z8 1188 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 LYPLAL1Q5VWZ2 237 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 METTL2BQ6P1Q9 378 aaKnown RBP13.78□□□□□ -0.2
HOXC11-202ENST00000546378 POMZP3Q6PJE2 187 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 XKRXQ6PP77 449 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms