RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 FAM222BQ8WU58 562 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 WNT2BQ93097 391 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 SFXN2Q96NB2 322 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 ANKRA2Q9H9E1 313 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 L2HGDHQ9H9P8 463 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 C3orf14Q9HBI5 128 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 LRTM1Q9HBL6 345 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 DDX18Q9NVP1 670 aaKnown RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 C1orf109Q9NX04 203 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 DNAJB12Q9NXW2 375 aaKnown RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 TEX15Q9BXT5 2789 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 TLDC2A0PJX2 215 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 NPIPB8E9PQR5 432 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 LINC01387J3KSC0 135 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 AZIN1O14977 448 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 CD1EP15812 388 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 PRPH2P23942 346 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 DPP4P27487 766 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 MC3RP41968 323 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 ZNF136P52737 540 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 DGKQP52824 942 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 EEFSECP57772 596 aaKnown RBP8.51□□□□□ -1.05
YBX3-218ENST00000546298 PSG6Q00889 435 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 SRYQ05066 204 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 GAB1Q13480 694 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 BCL2A1Q16548 175 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 VPS26BQ4G0F5 336 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 SH2D4BQ5SQS7 431 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 NPSR1Q6W5P4 371 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 RNF165Q6ZSG1 346 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 ZZZ3Q8IYH5 903 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 C4orf33Q8N1A6 199 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 OR2L13Q8N349 312 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 RIBC1Q8N443 379 aaPredicted RBP8.51□□□□□ -1.05
YBX3-218ENST00000546298 NAXEQ8NCW5 288 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 CEP70Q8NHQ1 597 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 GOT1L1Q8NHS2 421 aaPredicted RBP8.51□□□□□ -1.05
YBX3-218ENST00000546298 EPS8L3Q8TE67 593 aaKnown RBP8.51□□□□□ -1.05
YBX3-218ENST00000546298 EFHD2Q96C19 240 aaPredicted RBP8.51□□□□□ -1.05
YBX3-218ENST00000546298 ELP4Q96EB1 424 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 ZNF764Q96H86 408 aaPredicted RBP8.51□□□□□ -1.05
YBX3-218ENST00000546298 AMDHD1Q96NU7 426 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 UCN2Q96RP3 112 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 CCT7Q99832 543 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 SH3GL2Q99962 352 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 SFXN3Q9BWM7 321 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 POLDIP3Q9BY77 421 aaKnown RBP8.51□□□□□ -1.05
YBX3-218ENST00000546298 GLIPR2Q9H4G4 154 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 PTGES2Q9H7Z7 377 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 EML4Q9HC35 981 aaKnown RBP8.51□□□□□ -1.05
YBX3-218ENST00000546298 PPP4R1LQ9P1A2 415 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 CBLCQ9ULV8 474 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 ABCG2Q9UNQ0 655 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 TMED5Q9Y3A6 229 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 DNAJC13O75165 2243 aa8.51□□□□□ -1.05
YBX3-218ENST00000546298 ABCA12Q86UK0 2595 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 ITPR2Q14571 2701 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 TUBAL3A6NHL2 446 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 EEF1E1-BLOC1S5C9J1V9 151 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 UPK1AO00322 258 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 PDPK1O15530 556 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 EEF1E1O43324 174 aaKnown RBP8.5□□□□□ -1.05
YBX3-218ENST00000546298 SCO2O43819 266 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 TBX19O60806 448 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 CTAG2O75638 210 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 RCBTB2O95199 551 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 KCNH1O95259 989 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 IL33O95760 270 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 TMIGD3P0DMS9 266 aaPredicted RBP8.5□□□□□ -1.05
YBX3-218ENST00000546298 PRPS2P11908 318 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 PEPDP12955 493 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 ZNF708P17019 499 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 POU3F2P20265 443 aaPredicted RBP8.5□□□□□ -1.05
YBX3-218ENST00000546298 EVI2BP34910 448 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 GPC1P35052 558 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 ASMTP46597 345 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 STARP49675 285 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 GFRA1P56159 465 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 DSCR4P56555 118 aaPredicted RBP8.5□□□□□ -1.05
YBX3-218ENST00000546298 WNT3P56703 355 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 SORDQ00796 357 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 IFFO1Q0D2I5 559 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 DAZAP2Q15038 168 aaPredicted RBP8.5□□□□□ -1.05
YBX3-218ENST00000546298 KIAA0040Q15053 153 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 FLYWCH1Q4VC44 716 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 DCST1Q5T197 706 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 CLEC6AQ6EIG7 209 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 OR5M10Q6IEU7 315 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 POMZP3Q6PJE2 187 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 TMEM107Q6UX40 140 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 SPNS3Q6ZMD2 512 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 C10orf107Q8IVU9 208 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 LRRN4CLQ8ND94 238 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 OR4N2Q8NGD1 307 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 RNF138Q8WVD3 245 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 PPCDCQ96CD2 204 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 ZBED6CLQ96FA7 236 aaPredicted RBP8.5□□□□□ -1.05
YBX3-218ENST00000546298 TUBA1CQ9BQE3 449 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 LMF2Q9BU23 707 aaKnown RBP8.5□□□□□ -1.05
YBX3-218ENST00000546298 GATA5Q9BWX5 397 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms