RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ZNF461Q8TAF7 563 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 CEP76Q8TAP6 659 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 DACT3Q96B18 629 aaPredicted RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 SPATA5L1Q9BVQ7 753 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 CNIH4Q9P003 139 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 BACE2Q9Y5Z0 518 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 STON1Q9Y6Q2 735 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 RNF215Q9Y6U7 377 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 LOC105369274A0A096LPK9 316 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 A0A1B0GVC2 190 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 A6NIN4 97 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 IGHA1P01876 353 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 CTSAP10619 480 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 DNASE1P24855 282 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 SRP54P61011 504 aaKnown RBP13.34□□□□□ -0.27
SRP54-202ENST00000546080 MLLT1Q03111 559 aaPredicted RBP13.34□□□□□ -0.27
SRP54-202ENST00000546080 TLE2Q04725 743 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 TSPAN31Q12999 210 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 MPP7Q5T2T1 576 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 HACD4Q5VWC8 232 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 ZNF322Q6U7Q0 402 aaPredicted RBP13.34□□□□□ -0.27
SRP54-202ENST00000546080 LYPD4Q6UWN0 246 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 RASSF6Q6ZTQ3 369 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 KCTD20Q7Z5Y7 419 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 OAFQ86UD1 273 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 OR4N4Q8N0Y3 316 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 HSD17B8Q92506 261 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 HGDQ93099 445 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 GLYATL1Q969I3 302 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 TM4SF18Q96CE8 201 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 KCTD12Q96CX2 325 aaKnown RBP13.34□□□□□ -0.27
SRP54-202ENST00000546080 TEX12Q9BXU0 123 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 LIPT1Q9Y234 373 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 EXOGQ9Y2C4 368 aaKnown RBP13.34□□□□□ -0.27
SRP54-202ENST00000546080 KIF26AQ9ULI4 1882 aaPredicted RBP13.34□□□□□ -0.27
SRP54-202ENST00000546080 A0A1B0GVI7 797 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 HRO43593 1189 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 EPPINO95925 133 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 SYPP08247 313 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 NAGAP17050 411 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 PCBP4P57723 403 aaKnown RBP13.34□□□□□ -0.27
SRP54-202ENST00000546080 TAS2R41P59536 307 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 AADACL4Q5VUY2 407 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 PYHIN1Q6K0P9 492 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 SLC30A6Q6NXT4 461 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 RTL4Q6ZR62 310 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 KRT78Q8N1N4 520 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 CPXM2Q8N436 756 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 PCSK9Q8NBP7 692 aaKnown RBP13.34□□□□□ -0.27
SRP54-202ENST00000546080 OR8K5Q8NH50 307 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 BBS10Q8TAM1 723 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 FAM46AQ96IP4 442 aaKnown RBP13.34□□□□□ -0.27
SRP54-202ENST00000546080 ZNF649Q9BS31 505 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 CFAP97Q9P2B7 532 aa13.34□□□□□ -0.27
SRP54-202ENST00000546080 GLTPD2A6NH11 291 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 TMEM88BA6NKF7 163 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 A8MUA0 341 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 BET1O15155 118 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 SURF4O15260 269 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 TBX19O60806 448 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 MPC2O95563 127 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 RRASP10301 218 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 GNSP15586 552 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 NPR2P20594 1047 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 CTGFP29279 349 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 TRIM23P36406 574 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 EPHA5P54756 1037 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 HSD17B12Q53GQ0 312 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 SMARCD3Q6STE5 483 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 RRM2BQ7LG56 351 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 CFAP206Q8IYR0 622 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 CMTM8Q8IZV2 173 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
SRP54-202ENST00000546080 TOMM5Q8N4H5 51 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 ESX1Q8N693 406 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 AIFM2Q9BRQ8 373 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 MRPL9Q9BYD2 267 aaKnown RBP13.33□□□□□ -0.28
SRP54-202ENST00000546080 ERVMER34-1Q9H9K5 563 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 ZNF334Q9HCZ1 680 aaPredicted RBP13.33□□□□□ -0.28
SRP54-202ENST00000546080 TNFRSF10DQ9UBN6 386 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 RASD1Q9Y272 281 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 PLXNA2O75051 1894 aa13.33□□□□□ -0.28
SRP54-202ENST00000546080 MEIKINA0A087WXM9 373 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 ABLIM3O94929 683 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 SOX30O94993 753 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 NFATC1O95644 943 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 CKMP06732 381 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 PEPDP12955 493 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 GIFP27352 417 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 HTR1FP30939 366 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 FRKP42685 505 aaPredicted RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 CAMK2DQ13557 499 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 PRAMEF14Q5SWL7 426 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 PRAMEF13Q5VWM6 474 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 TPGS2Q68CL5 300 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 PRSS42Q7Z5A4 293 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 ADGRG3Q86Y34 549 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 NPAS4Q8IUM7 802 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 BBS1Q8NFJ9 593 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms