RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PRKAG1P54619 331 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 PSMD4P55036 377 aaKnown RBP14.38□□□□□ -0.11
CCDC78-216ENST00000544996 PRR5P85299 388 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 ADORA2A-AS1P86434 159 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 ART3Q13508 389 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 LSM12Q3MHD2 195 aaKnown RBP14.38□□□□□ -0.11
CCDC78-216ENST00000544996 AGBL2Q5U5Z8 902 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 FNDC7Q5VTL7 733 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 OR4N2Q8NGD1 307 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 OR5M9Q8NGP3 310 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 NEIL3Q8TAT5 605 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 RAB3IL1Q8TBN0 382 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 EFHD2Q96C19 240 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-216ENST00000544996 DTNBP1Q96EV8 351 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 MS4A4EQ96PG1 132 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 DMRTA2Q96SC8 542 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 LMF2Q9BU23 707 aaKnown RBP14.38□□□□□ -0.11
CCDC78-216ENST00000544996 NUF2Q9BZD4 464 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 GALNT9Q9HCQ5 603 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 EQTNQ9NQ60 294 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 ASIC5Q9NY37 505 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 NTMQ9P121 344 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 CBLCQ9ULV8 474 aa14.38□□□□□ -0.11
CCDC78-216ENST00000544996 DOPEY1Q5JWR5 2465 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 A0A1W2PRB8 838 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 ADAM10O14672 748 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 SNPHO15079 494 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 EMC8O43402 210 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 CBR3O75828 277 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 KCNH1O95259 989 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 HPNP05981 417 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 ACVR2AP27037 513 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 GABRA3P34903 492 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 GCKP35557 465 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 TRPC1P48995 793 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 CDK9P50750 372 aaKnown RBP14.37□□□□□ -0.11
CCDC78-216ENST00000544996 CLDN8P56748 225 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 GAB1Q13480 694 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 EMC4Q5J8M3 183 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 ZNF585AQ6P3V2 769 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 WDR53Q7Z5U6 358 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-216ENST00000544996 LRRC34Q8IZ02 419 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 KRTCAP2Q8N6L1 136 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 CDRT4Q8N9R6 151 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 NUP43Q8NFH3 380 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 GPR151Q8TDV0 419 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 NTNG2Q96CW9 530 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 SLC6A15Q9H2J7 730 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 UBQLN3Q9H347 655 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 MANSC1Q9H8J5 431 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 PNPLA3Q9NST1 481 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 PNPOQ9NVS9 261 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 COQ3Q9NZJ6 369 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 TNFRSF10DQ9UBN6 386 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 KLF2Q9Y5W3 355 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-216ENST00000544996 SNX8Q9Y5X2 465 aa14.37□□□□□ -0.11
CCDC78-216ENST00000544996 C15orf38-AP3S2A0A0A6YYH1 394 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 C2orf72A6NCS6 295 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 PRSS44E7EML9 344 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 WDR1O75083 606 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 LBPP18428 481 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 EFNA1P20827 205 aaPredicted RBP14.36□□□□□ -0.11
CCDC78-216ENST00000544996 PTPN6P29350 595 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 PTGDSP41222 190 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 RFX3P48380 749 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 CLK3P49761 638 aaKnown RBP14.36□□□□□ -0.11
CCDC78-216ENST00000544996 C21orf58P58505 322 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 ZCCHC12Q6PEW1 402 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 ACAD11Q709F0 780 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 PLCZ1Q86YW0 608 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 RIMKLAQ8IXN7 391 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 GOLGA6L1Q8N7Z2 621 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 OR5P2Q8WZ92 322 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 SLC9A6Q92581 669 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 RND1Q92730 232 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 COQ8BQ96D53 544 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 DUSP26Q9BV47 211 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 BHLHE41Q9C0J9 482 aaPredicted RBP14.36□□□□□ -0.11
CCDC78-216ENST00000544996 MEAF6Q9HAF1 191 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 ALKBH4Q9NXW9 302 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 SPRR3Q9UBC9 169 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 PCDHGB3Q9Y5G1 929 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 HRH3Q9Y5N1 445 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 WIF1Q9Y5W5 379 aa14.36□□□□□ -0.11
CCDC78-216ENST00000544996 TRPC5OSA6NMA1 111 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 SLCO1B7G3V0H7 640 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 CFLARO15519 480 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 SNNO75324 88 aaPredicted RBP14.35□□□□□ -0.11
CCDC78-216ENST00000544996 IL33O95760 270 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 HOXD4P09016 255 aaPredicted RBP14.35□□□□□ -0.11
CCDC78-216ENST00000544996 CYP4B1P13584 511 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 GABRA1P14867 456 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 COL8A1P27658 744 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 EVI2BP34910 448 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 PRIM2P49643 509 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 DIO3P55073 304 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 PGS1Q32NB8 556 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 SPDYE7PQ495Y7 208 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 HIST2H2BCQ6DN03 193 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 NCCRP1Q6ZVX7 275 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms