RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 MBNL1Q9NR56 388 aaKnown RBP12.23□□□□□ -0.45
CPSF7-223ENST00000544669 CLCA2Q9UQC9 943 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 TMEM5Q9Y2B1 443 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 GPSM3Q9Y4H4 160 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 OR1A2Q9Y585 309 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 PCDHGB7Q9Y5F8 929 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 CDH10Q9Y6N8 788 aa12.23□□□□□ -0.45
CPSF7-223ENST00000544669 MUC22E2RYF6 1773 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-223ENST00000544669 A0A1W2PQL4 384 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-223ENST00000544669 ANTXRLA6NF34 631 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 PGRMC2O15173 223 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 FMO6PO60774 539 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 IGFBP1P08833 259 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-223ENST00000544669 NDUFV2P19404 249 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 PAICSP22234 425 aaKnown RBP12.22□□□□□ -0.45
CPSF7-223ENST00000544669 ATP6V1E1P36543 226 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 SLC1A3P43003 542 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 OMPP47874 163 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 HNRNPA0Q13151 305 aaKnown RBP12.22□□□□□ -0.45
CPSF7-223ENST00000544669 DUSP8Q13202 625 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 RIN1Q13671 783 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 KIR2DS3Q14952 304 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 ZSWIM7Q19AV6 140 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 ARHGAP11BQ3KRB8 267 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 MANEAQ5SRI9 462 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 ASPGQ86U10 573 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 AMIGO1Q86WK6 493 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 VWA5B2Q8N398 1253 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 IQCF1Q8N6M8 205 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 ZNF655Q8N720 491 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-223ENST00000544669 C19orf18Q8NEA5 215 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 OR4K14Q8NGD5 310 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 OTULINQ96BN8 352 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 MCHR1Q99705 422 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 APOOQ9BUR5 198 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 KLHL31Q9H511 634 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 SLC6A20Q9NP91 592 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 POLE3Q9NRF9 147 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 C14orf105Q9NVL8 296 aa12.22□□□□□ -0.45
CPSF7-223ENST00000544669 CXXC1Q9P0U4 656 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-223ENST00000544669 CAB39Q9Y376 341 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-223ENST00000544669 OTOL1A6NHN0 477 aaPredicted RBP12.21□□□□□ -0.45
CPSF7-223ENST00000544669 ISM1B1AKI9 464 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 H3BQ06 376 aaPredicted RBP12.21□□□□□ -0.45
CPSF7-223ENST00000544669 CASKO14936 926 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 POLR1CO15160 346 aaPredicted RBP12.21□□□□□ -0.45
CPSF7-223ENST00000544669 SURF4O15260 269 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 PLRG1O43660 514 aaKnown RBP12.21□□□□□ -0.45
CPSF7-223ENST00000544669 RCBTB2O95199 551 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 IGHA1P01876 353 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 DBIP07108 87 aaKnown RBP12.21□□□□□ -0.45
CPSF7-223ENST00000544669 ADRA2AP08913 450 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 FUT4P22083 530 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 GAS1P54826 345 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 CHRNEQ04844 493 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 MESP2Q0VG99 397 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 FUT5Q11128 374 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 TAB1Q15750 504 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 AADACL4Q5VUY2 407 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 C22orf42Q6IC83 251 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 TYW3Q6IPR3 259 aaKnown RBP12.21□□□□□ -0.45
CPSF7-223ENST00000544669 TMEM53Q6P2H8 277 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 NRARPQ7Z6K4 114 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 AMER3Q8N944 861 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 TMEM145Q8NBT3 493 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 OR52L1Q8NGH7 329 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 GANCQ8TET4 914 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 LCN9Q8WX39 176 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 FAM131CQ96AQ9 280 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 SLC41A3Q96GZ6 507 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 DEPDC7Q96QD5 511 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 OR2M4Q96R27 311 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 LMAN2LQ9H0V9 348 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 TPK1Q9H3S4 243 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 ABCB9Q9NP78 766 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 C14orf119Q9NWQ9 140 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 PLEKHB1Q9UF11 243 aaPredicted RBP12.21□□□□□ -0.45
CPSF7-223ENST00000544669 TBC1D24Q9ULP9 559 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 SATB2Q9UPW6 733 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 BAIAP2Q9UQB8 552 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 KCNK6Q9Y257 313 aa12.21□□□□□ -0.45
CPSF7-223ENST00000544669 SF3B6Q9Y3B4 125 aaKnown RBP12.21□□□□□ -0.45
CPSF7-223ENST00000544669 PCNTO95613 3336 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 A0A0G2JN53 185 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 CENPBD1B2RD01 187 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 B3GALT2O43825 422 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 IDH3BO43837 385 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 RNGTTO60942 597 aaKnown RBP12.21□□□□□ -0.46
CPSF7-223ENST00000544669 EPPINO95925 133 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 PRKAR1AP10644 381 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 BMP7P18075 431 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 F8A1P23610 371 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 TAS2R43P59537 309 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 KIAA1024LP59773 190 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 TNFRSF17Q02223 184 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 CD300CQ08708 224 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 RIPPLY1Q0D2K3 151 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 GPM6BQ13491 265 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 PGGHGQ32M88 737 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 ITPRIPL2Q3MIP1 535 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms