RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 DNASE1L1P49184 302 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 EMDP50402 254 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 DIO3P55073 304 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 DSCR4P56555 118 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 FBXW4P57775 412 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 EMX2Q04743 252 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF844Q08AG5 666 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 C17orf67Q0P5P2 114 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 PMPCAQ10713 525 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 HSPB3Q12988 150 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 FGFBP1Q14512 234 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 EXOSC7Q15024 291 aaKnown RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 MLC1Q15049 377 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 TESK1Q15569 626 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 CHI3L2Q15782 390 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF630Q2M218 657 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 TRMT12Q53H54 448 aaKnown RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF628Q5EBL2 1059 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 TCHHL1Q5QJ38 904 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ATAD3BQ5T9A4 648 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 CES4AQ5XG92 561 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 SP5Q6BEB4 398 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF585AQ6P3V2 769 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 TMEM107Q6UX40 140 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 GDF7Q7Z4P5 450 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 IFNEQ86WN2 208 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 KIF18BQ86Y91 864 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 PLCZ1Q86YW0 608 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 LACC1Q8IV20 430 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF321PQ8N8H1 164 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 OR52N2Q8NGI0 321 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 OR9A2Q8NGT5 310 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 OR14L1PQ8NHC6 308 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 GPR151Q8TDV0 419 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ITLN2Q8WWU7 325 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 KAT2AQ92830 837 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 UCN3Q969E3 161 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ABTB1Q969K4 478 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 SDCCAG3Q96C92 435 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ELP4Q96EB1 424 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 C11orf24Q96F05 449 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 SLC35A4Q96G79 324 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF681Q96N22 645 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 AMDHD1Q96NU7 426 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 MS4A4EQ96PG1 132 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 KCNA7Q96RP8 456 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ADOQ96SZ5 270 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 PIGQQ9BRB3 760 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ITPAQ9BY32 194 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 BHLHE41Q9C0J9 482 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 NXF5Q9H1B4 397 aaKnown RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF703Q9H7S9 590 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 CALHM2Q9HA72 323 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 FOLH1BQ9HBA9 442 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 SH2D2AQ9NP31 389 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 DEPPQ9NTK1 212 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 MRGBPQ9NV56 204 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 THAP1Q9NVV9 213 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 PAQR5Q9NXK6 330 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 GIN1Q9NXP7 522 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 TUBA8Q9NY65 449 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 TINAGQ9UJW2 476 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 RAP2CQ9Y3L5 183 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 DNAJC15Q9Y5T4 150 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 WIF1Q9Y5W5 379 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 SNX8Q9Y5X2 465 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 V9GYY5 206 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 CROCCQ5TZA2 2017 aa5.14□□□□□ -1.59
CLSTN3-215ENST00000544584 DNAJC13O75165 2243 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 A0A087WZY1 265 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 A0A1W2PRB8 838 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 GJE1A6NN92 205 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 G3V3Y1 287 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 HRKO00198 91 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 SCDO00767 359 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 UBFD1O14562 309 aaKnown RBP5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 PIP5K1BO14986 540 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 SNPHO15079 494 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 SCAMP2O15127 329 aaKnown RBP5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 AKAP10O43572 662 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 DIAPH2O60879 1101 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 ICOSLGO75144 302 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 NADKO95544 446 aaPredicted RBP5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 CBX7O95931 251 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 HPNP05981 417 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 VIMP08670 466 aaKnown RBP5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 CT62P0C5K7 136 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 FCGR2AP12318 317 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 BCKDHAP12694 445 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 PEPDP12955 493 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 LBPP18428 481 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 SRD5A2P31213 254 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 EVI2BP34910 448 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 OPRM1P35372 400 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 TIMP3P35625 211 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 MC3RP41968 323 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 SLC1A6P48664 564 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 HTR6P50406 440 aa5.13□□□□□ -1.59
CLSTN3-215ENST00000544584 CDK9P50750 372 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms