RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 POLR1CO15160 346 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 DENRO43583 198 aaKnown RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 LILRB3O75022 631 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 IFNA7P01567 189 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 C1SP09871 688 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 OSMP13725 252 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 BMXP51813 675 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 CTBP2P56545 445 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 THRSPQ92748 146 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 TESCQ96BS2 214 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 CRB3Q9BUF7 120 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 VDAC3Q9Y277 283 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 MAGED1Q9Y5V3 778 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 TEX13CA0A0J9YWL9 993 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 PVALBP20472 110 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 MICAQ29983 383 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 TMEM173Q86WV6 379 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 ZNF584Q8IVC4 421 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 PGBD5Q8N414 524 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 TMEM181Q9P2C4 612 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 A6NLC8 198 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 RFXAPO00287 272 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 RAD1O60671 282 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 LCKP06239 509 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 AOAHP28039 575 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 GJA4P35212 333 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 RAB12Q6IQ22 244 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 PYHIN1Q6K0P9 492 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 ZNF534Q76KX8 674 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 MAMDC2Q7Z304 686 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 MFSD6LQ8IWD5 586 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 ZNF440Q8IYI8 595 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 VWA5B2Q8N398 1253 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 ASB15Q8WXK1 588 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 SLC25A44Q96H78 314 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 TP63Q9H3D4 680 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 MAP1BP46821 2468 aaKnown RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 C1orf105O95561 183 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 MYF6P23409 242 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 SELENOVP59797 346 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 DLX2Q07687 328 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 NTMT1Q9BV86 223 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 TREM1Q9NP99 234 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 ERVK-19Q9WJR5 959 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 SOBPA7XYQ1 873 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 MAGEA12P43365 314 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 EXOSC7Q15024 291 aaKnown RBP12.1□□□□□ -0.47
CHD4-211ENST00000544484 TBRG1Q3YBR2 411 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 FAM43BQ6ZT52 329 aaPredicted RBP12.1□□□□□ -0.47
CHD4-211ENST00000544484 CPOQ8IVL8 374 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 CDRT4Q8N9R6 151 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 ZNF696Q9H7X3 374 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 STUB1Q9UNE7 303 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 SLC7A11Q9UPY5 501 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 NAALAD2Q9Y3Q0 740 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 GPR45Q9Y5Y3 372 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 A0A0J9YY10 115 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 PRSS38A1L453 326 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 PCDH17O14917 1159 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 TOXO94900 526 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 RETP07949 1114 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 UQCRC1P31930 480 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 CCNJQ5T5M9 372 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 OR5J2Q8NH18 312 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 OR14L1PQ8NHC6 308 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 AKAP1Q92667 903 aaKnown RBP eCLIP12.1□□□□□ -0.474e-9■■□□□ 11.7
CHD4-211ENST00000544484 PCDHB16Q9NRJ7 776 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 RNASET2O00584 256 aaKnown RBP12.1□□□□□ -0.47
CHD4-211ENST00000544484 ARHGEF15O94989 841 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 CPNE6O95741 557 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 XCR1P46094 333 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 ERV3-1Q14264 604 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 CHRFAM7AQ494W8 412 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 OR2T4Q8NH00 348 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 ASB11Q8WXH4 323 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 CDS1Q92903 461 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 NINJ1Q92982 152 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 C20orf27Q9GZN8 174 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 LHPPQ9H008 270 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 SLAMF8Q9P0V8 285 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 NUAK1O60285 661 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 JRKO75564 520 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 SFTPBP07988 381 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 ADRA1AP35348 466 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 PRKXP51817 358 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 ACTA2P62736 377 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 ACTG2P63267 376 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 CDKL4Q5MAI5 379 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 GPR137CQ8N3F9 429 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 BOLLQ8N9W6 283 aaKnown RBP12.1□□□□□ -0.47
CHD4-211ENST00000544484 TMIGD2Q96BF3 282 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 ZMYND19Q96E35 227 aaPredicted RBP12.1□□□□□ -0.47
CHD4-211ENST00000544484 MYEF2Q9P2K5 600 aaKnown RBP12.1□□□□□ -0.47
CHD4-211ENST00000544484 RGS9O75916 674 aaPredicted RBP12.1□□□□□ -0.47
CHD4-211ENST00000544484 KLKB1P03952 638 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 OPN1LWP04000 364 aa12.1□□□□□ -0.47
CHD4-211ENST00000544484 FNTBP49356 437 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms