RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ZNF267Q14586 743 aaPredicted RBP18.45■□□□□ 0.54
COPS7A-218ENST00000543939 CLPPQ16740 277 aaPredicted RBP18.45■□□□□ 0.54
COPS7A-218ENST00000543939 AP1ARQ63HQ0 302 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 QSOX2Q6ZRP7 698 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 THAP5Q7Z6K1 395 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 C8orf59Q8N0T1 100 aaPredicted RBP18.45■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF786Q8N393 782 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 CNDP2Q96KP4 475 aaKnown RBP18.45■□□□□ 0.54
COPS7A-218ENST00000543939 VSTM2LQ96N03 204 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 PTCHD1Q96NR3 888 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 ALPK1Q96QP1 1244 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 RIBC2Q9H4K1 309 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 SYNDIG1Q9H7V2 258 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 RLIMQ9NVW2 624 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 SRPK3Q9UPE1 567 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 HCN4Q9Y3Q4 1203 aa18.45■□□□□ 0.54
COPS7A-218ENST00000543939 IGKV3D-11A0A0A0MRZ8 115 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 GXYLT2A0PJZ3 443 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 ARRDC5A6NEK1 342 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 E9PQ18 207 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 UGT2B11O75310 529 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 CCNB2O95067 398 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 IFNA16P05015 189 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 H1F0P07305 194 aaKnown RBP18.44■□□□□ 0.54
COPS7A-218ENST00000543939 ATXN8OSP0DMR3 200 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 RPS4Y1P22090 263 aaKnown RBP18.44■□□□□ 0.54
COPS7A-218ENST00000543939 PSG6Q00889 435 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 IL1RL1Q01638 556 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 IL18R1Q13478 541 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 NPTX1Q15818 432 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 KCTD21Q4G0X4 260 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 C1orf189Q5VU69 101 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF691Q5VV52 312 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 PEX5LQ8IYB4 626 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF619Q8N2I2 560 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 LOXL4Q96JB6 756 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 MRPS26Q9BYN8 205 aaKnown RBP18.44■□□□□ 0.54
COPS7A-218ENST00000543939 ARRDC1-AS1Q9H2J1 176 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 POLE3Q9NRF9 147 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 FBXO34Q9NWN3 711 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF443Q9Y2A4 671 aaPredicted RBP18.44■□□□□ 0.54
COPS7A-218ENST00000543939 KMT2EQ8IZD2 1858 aa18.44■□□□□ 0.54
COPS7A-218ENST00000543939 TRBV4-1A0A0J9YWV2 114 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 TRIM64A6NGJ6 449 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 AGAP5A6NIR3 686 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 KIAA0513O60268 411 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 PRAMEF2O60811 474 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 THBS1P07996 1170 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 CLK3P49761 638 aaKnown RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 SMIM11AP58511 58 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 GPR68Q15743 365 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 ARHGAP40Q5TG30 622 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 RHBDD2Q6NTF9 364 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 TAGAPQ8N103 731 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 CLIP4Q8N3C7 705 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 OR9Q2Q8NGE9 314 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 PMM1Q92871 262 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 OR6C1Q96RD1 312 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 FUZQ9BT04 418 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 CNPPD1Q9BV87 410 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 GABARAPL3Q9BY60 117 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 SIDT1Q9NXL6 827 aaKnown RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 SLC13A4Q9UKG4 626 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF232Q9UNY5 417 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 ERVK-19Q9WJR5 959 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 GPR55Q9Y2T6 319 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 ASCC3Q8N3C0 2202 aaKnown RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 BCKDKO14874 412 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF883P0CG24 379 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 CBLP22681 906 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 ELAVL4P26378 380 aaKnown RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 RHAGQ02094 409 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 PIN1Q13526 163 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 ZNHIT3Q15649 155 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 TCEAL6Q6IPX3 200 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF770Q6IQ21 691 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 TSPYL5Q86VY4 417 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF615Q8N8J6 731 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 TSPAN14Q8NG11 270 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 TCEAL3Q969E4 200 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 PRRC1Q96M27 445 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 GFM1Q96RP9 751 aaKnown RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 YTHDF1Q9BYJ9 559 aaKnown RBP18.43■□□□□ 0.54
COPS7A-218ENST00000543939 PCDHGA8Q9Y5G5 932 aa18.43■□□□□ 0.54
COPS7A-218ENST00000543939 CENPVL1A0A0U1RR11 272 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 NTN3O00634 580 aaPredicted RBP18.42■□□□□ 0.54
COPS7A-218ENST00000543939 BRINP1O60477 761 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 KCNK2O95069 426 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 CLPSP04118 112 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 GUSBP08236 651 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 CYP4B1P13584 511 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 RPS6KA3P51812 740 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 PGDP52209 483 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 EFNA3P52797 238 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 ISL1P61371 349 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 NPRL3Q12980 569 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 KEAP1Q14145 624 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 LARS2Q15031 903 aaKnown RBP18.42■□□□□ 0.54
COPS7A-218ENST00000543939 FIGNL1Q6PIW4 674 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF836Q6ZNA1 936 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms