RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 GASTP01350 101 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 IGLV3-25P01717 112 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 CDK1P06493 297 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 ANXA3P12429 323 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 AOAHP28039 575 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 PSMB10P40306 273 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 APOFQ13790 326 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 CTU2Q2VPK5 515 aaKnown RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 TRAM1L1Q8N609 369 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 TTLQ8NG68 377 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 DNAJA4Q8WW22 397 aaPredicted RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 OR2B2Q9GZK3 357 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 EGLN3Q9H6Z9 239 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 VNN3Q9NY84 501 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 CLEC2DQ9UHP7 191 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 DICER1Q9UPY3 1922 aaKnown RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 SIP14410 1827 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 A0A1B0GV50 99 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 IGFBP1P08833 259 aaPredicted RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 NDUFV2P19404 249 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 CHMP24386 653 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 SMCO1Q147U7 214 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 MEDAGQ5VYS4 303 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 RAB12Q6IQ22 244 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 LRFN4Q6PJG9 635 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 Q6ZNX1 250 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 STX12Q86Y82 276 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 GALNT11Q8NCW6 608 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 ASB15Q8WXK1 588 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 RNF121Q9H920 327 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 RLIMQ9NVW2 624 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 ALKBH4Q9NXW9 302 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 EXOSC1Q9Y3B2 195 aaKnown RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 OR6C74A6NCV1 312 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ANTXRLA6NF34 631 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 LRRN3E7EW58 273 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 SERPINA3P01011 423 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 MAGEA12P43365 314 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 HSD17B12Q53GQ0 312 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 GNPDA2Q8TDQ7 276 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 METTL21AQ8WXB1 218 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 LMF1Q96S06 567 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 SAP130Q9H0E3 1048 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 SLC25A18Q9H1K4 315 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 LRRN3Q9H3W5 708 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 DDX31Q9H8H2 851 aaKnown RBP12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 MED20Q9H944 212 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 CUEDC1Q9NWM3 386 aaPredicted RBP12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 BRCA2P51587 3418 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 WDR90Q96KV7 1748 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 FAM155AB1AL88 458 aaPredicted RBP12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 GPR89AB7ZAQ6 455 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 NUAK1O60285 661 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 GATBO75879 557 aaKnown RBP12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 RENP00797 406 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 SPARCP09486 303 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 GPR89BP0CG08 455 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 GTF2F2P13984 249 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ZNF91Q05481 1191 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 RAB33AQ14088 237 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 TMEM69Q5SWH9 247 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 PLCZ1Q86YW0 608 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 OR9A2Q8NGT5 310 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 SETD6Q8TBK2 473 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 OR4K3Q96R72 315 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 CDH10Q9Y6N8 788 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 TEX13CA0A0J9YWL9 993 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 A0A1W2PQU0 124 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 PIP5K1CO60331 668 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ADORA3P0DMS8 318 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 CERS1P27544 350 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 S100A10P60903 97 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 WDR5P61964 334 aaKnown RBP12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 CD300CQ08708 224 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 POU4F3Q15319 338 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 GRK1Q15835 563 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 TCEAL5Q5H9L2 206 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 PIP5KL1Q5T9C9 394 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ISL2Q96A47 359 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 METTL8Q9H825 291 aaKnown RBP12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 THSD1Q9NS62 852 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ZNF639Q9UID6 485 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 LAMP5Q9UJQ1 280 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 BRCA1P38398 1863 aaKnown RBP12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 EDDM13A0A1B0GTR0 161 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 RHPN2P1A8MT19 583 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ZNF701M0R085 212 aaPredicted RBP12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ADAP00813 363 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 CSTAP01040 98 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 HTR1AP08908 422 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 HOXB2P14652 356 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 HOXC13P31276 330 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 TATDN3Q17R31 274 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 TMEM44Q2T9K0 475 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 AGAP6Q5VW22 663 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ELP2Q6IA86 826 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 ZNF852Q6ZMS4 543 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 CBLL1Q75N03 491 aa12.23□□□□□ -0.45
TUBGCP2-210ENST00000543663 CHPT1Q8WUD6 406 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms