RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 CYP27C1Q4G0S4 372 aa11□□□□□ -0.65
DDB1-223ENST00000543658 ABHD17BQ5VST6 288 aa11□□□□□ -0.65
DDB1-223ENST00000543658 TCTN3Q6NUS6 607 aa11□□□□□ -0.65
DDB1-223ENST00000543658 OPN5Q6U736 354 aa11□□□□□ -0.65
DDB1-223ENST00000543658 GPR155Q7Z3F1 870 aa11□□□□□ -0.65
DDB1-223ENST00000543658 RPS19BP1Q86WX3 136 aaKnown RBP11□□□□□ -0.65
DDB1-223ENST00000543658 MICU2Q8IYU8 434 aa11□□□□□ -0.65
DDB1-223ENST00000543658 TMEM156Q8N614 296 aa11□□□□□ -0.65
DDB1-223ENST00000543658 SLC15A4Q8N697 577 aa11□□□□□ -0.65
DDB1-223ENST00000543658 METTL25Q8N6Q8 603 aa11□□□□□ -0.65
DDB1-223ENST00000543658 RNF148Q8N7C7 305 aa11□□□□□ -0.65
DDB1-223ENST00000543658 HIPK4Q8NE63 616 aa11□□□□□ -0.65
DDB1-223ENST00000543658 NFKBIDQ8NI38 313 aa11□□□□□ -0.65
DDB1-223ENST00000543658 ASB15Q8WXK1 588 aa11□□□□□ -0.65
DDB1-223ENST00000543658 PIK3R3Q92569 461 aa11□□□□□ -0.65
DDB1-223ENST00000543658 SLC35A4Q96G79 324 aa11□□□□□ -0.65
DDB1-223ENST00000543658 RAB3IPQ96QF0 476 aaPredicted RBP11□□□□□ -0.65
DDB1-223ENST00000543658 TMEM38AQ9H6F2 299 aa11□□□□□ -0.65
DDB1-223ENST00000543658 LIN28AQ9H9Z2 209 aaKnown RBP11□□□□□ -0.65
DDB1-223ENST00000543658 A4GALTQ9NPC4 353 aa11□□□□□ -0.65
DDB1-223ENST00000543658 MYOTQ9UBF9 498 aa11□□□□□ -0.65
DDB1-223ENST00000543658 PACSIN3Q9UKS6 424 aa11□□□□□ -0.65
DDB1-223ENST00000543658 YARS2Q9Y2Z4 477 aaKnown RBP11□□□□□ -0.65
DDB1-223ENST00000543658 AKAP13Q12802 2813 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 GXYLT2A0PJZ3 443 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 A6NL46 340 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 K7ENP7 123 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 TO15178 435 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 TNFRSF21O75509 655 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 STX11O75558 287 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 OR2J2O76002 312 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 PDE5AO76074 875 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 C1QCP02747 245 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 NUDT7P0C024 238 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 CT45A8P0DMV1 189 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 CT45A9P0DMV2 189 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 BMP2P12643 396 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 HPGDP15428 266 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 ME2P23368 584 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 PCGF2P35227 344 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 PIGAP37287 484 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 MAN2A2P49641 1150 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 GSK3BP49841 420 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 CCL11P51671 97 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 RPP38P78345 283 aaKnown RBP10.99□□□□□ -0.65
DDB1-223ENST00000543658 CDK6Q00534 326 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 BNIP2Q12982 314 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 VMACQ2NL98 169 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 ARHGAP11BQ3KRB8 267 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 CT45A2Q5DJT8 189 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 CRB2Q5IJ48 1285 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 CCNJQ5T5M9 372 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 AGAP7PQ5VUJ5 663 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 FCRLBQ6BAA4 426 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 REEP3Q6NUK4 255 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 INO80CQ6PI98 192 aaPredicted RBP10.99□□□□□ -0.65
DDB1-223ENST00000543658 FIGNL1Q6PIW4 674 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 NPSR1Q6W5P4 371 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 NET1Q7Z628 596 aaPredicted RBP10.99□□□□□ -0.65
DDB1-223ENST00000543658 KRT73Q86Y46 540 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 ZZZ3Q8IYH5 903 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 DND1Q8IYX4 353 aaKnown RBP10.99□□□□□ -0.65
DDB1-223ENST00000543658 PRR22Q8IZ63 422 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 ZNF441Q8N8Z8 693 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 BBS10Q8TAM1 723 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 SLC26A7Q8TE54 656 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 APOBEC4Q8WW27 367 aaKnown RBP10.99□□□□□ -0.65
DDB1-223ENST00000543658 HOXB13Q92826 284 aaPredicted RBP10.99□□□□□ -0.65
DDB1-223ENST00000543658 TMBIM1Q969X1 311 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 CCDC124Q96CT7 223 aaKnown RBP10.99□□□□□ -0.65
DDB1-223ENST00000543658 OMA1Q96E52 524 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 TMEM19Q96HH6 336 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 AGAP4Q96P64 663 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 ZNF607Q96SK3 696 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 MUC13Q9H3R2 512 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 CPNE5Q9HCH3 593 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 POLE3Q9NRF9 147 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 GPR83Q9NYM4 423 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 MAGEL2Q9UJ55 1249 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 WDR45Q9Y484 360 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 ZNF451Q9Y4E5 1061 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 NPFFR2Q9Y5X5 522 aa10.99□□□□□ -0.65
DDB1-223ENST00000543658 EML6Q6ZMW3 1958 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 A0A087WV48 116 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 PRORSD1PA6NEY8 169 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 GSC2O15499 205 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 KCNK2O95069 426 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 H6PDO95479 791 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 ALPPP05187 535 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 HSD17B1P14061 328 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 ABCD3P28288 659 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 HTR1EP28566 365 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 MAP3K8P41279 467 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 MLF1P58340 268 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 CXADRP78310 365 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 RAPSNQ13702 412 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 EFR3AQ14156 821 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 SYPL1Q16563 259 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 FLYWCH1Q4VC44 716 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 PIGGQ5H8A4 983 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms