RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CYP27C1Q4G0S4 372 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 FAHD1Q6P587 224 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 ZC3H14Q6PJT7 736 aaKnown RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 DHRS4L2Q6PKH6 230 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 FRRS1Q6ZNA5 592 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 DBX2Q6ZNG2 339 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 WDR53Q7Z5U6 358 aaPredicted RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 OR52R1Q8NGF1 315 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 CYGBQ8WWM9 190 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 MBOAT4Q96T53 435 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 BARD1Q99728 777 aaKnown RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 FAM117AQ9C073 453 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 ZNF350Q9GZX5 532 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 NECTIN3Q9NQS3 549 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 POLE3Q9NRF9 147 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 SIDT1Q9NXL6 827 aaKnown RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 QPCTLQ9NXS2 382 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 DHCR7Q9UBM7 475 aaKnown RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 C3orf18Q9UK00 162 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 TESMINQ9Y4I5 508 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 ORC6Q9Y5N6 252 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 ARID1BQ8NFD5 2236 aaPredicted RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 USP34Q70CQ2 3546 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 IGKV3D-11A0A0A0MRZ8 115 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 SYNDIG1LA6NDD5 238 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 TRIM64CA6NLI5 447 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 NTN3O00634 580 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 HS6ST1O60243 411 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 PRAMEF2O60811 474 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 NKX2-2O95096 273 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 ZIC2O95409 532 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 LGI1O95970 557 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 S100A1P23297 94 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 IGFBP5P24593 272 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 PCSK6P29122 969 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 GRK6P43250 576 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 OR1D4P47884 311 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 HMGA2P52926 109 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 ZNF155Q12901 538 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 DCST2Q5T1A1 773 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 MLIPQ5VWP3 458 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 KDM4DQ6B0I6 523 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 TYW3Q6IPR3 259 aaKnown RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 RHBDD2Q6NTF9 364 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 OLIG3Q7RTU3 272 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 CYP4Z1Q86W10 505 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 SLITRK4Q8IW52 837 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 FKBP10Q96AY3 582 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 GFM1Q96RP9 751 aaKnown RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 TOR3AQ9H497 397 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 PNPLA3Q9NST1 481 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 PDP1Q9P0J1 537 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 ACAD8Q9UKU7 415 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 SLC9A8Q9Y2E8 581 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 KNL1Q8NG31 2342 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 ARRDC5A6NEK1 342 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 D6RAR5 112 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 GALR2O43603 387 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 NME6O75414 186 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 TNFAIP8O95379 198 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 EPPINO95925 133 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 GP1BAP07359 652 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 ITGAMP11215 1152 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 PRKACGP22612 351 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 DAPP51397 102 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 CDH12P55289 794 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 MYBPC1Q00872 1141 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 FUT7Q11130 342 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 TRA2AQ13595 282 aaKnown RBP eCLIP8.68□□□□□ -1.02
GNE-206ENST00000543356 ZNF311Q5JNZ3 666 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 ARHGAP40Q5TG30 622 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 PRAMEF17Q5VTA0 474 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 TTC23Q5W5X9 447 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 KRT80Q6KB66 452 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 COX18Q8N8Q8 333 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 DOK4Q8TEW6 326 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 FBXL20Q96IG2 436 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 SDF2Q99470 211 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 ARHGDIGQ99819 225 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 SAP130Q9H0E3 1048 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 SMOC1Q9H4F8 434 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 SYNDIG1Q9H7V2 258 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 ZNF696Q9H7X3 374 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 MTHFD2LQ9H903 347 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 CACYBPQ9HB71 228 aaKnown RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 FOLH1BQ9HBA9 442 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 MKKSQ9NPJ1 570 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 SELENONQ9NZV5 590 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 IFT52Q9Y366 437 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 WDR45Q9Y484 360 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 PCDHGB5Q9Y5G0 923 aa8.68□□□□□ -1.02
GNE-206ENST00000543356 HEMK1Q9Y5R4 338 aaPredicted RBP8.68□□□□□ -1.02
GNE-206ENST00000543356 J3KTA2 159 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 KIAA0513O60268 411 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 JRKO75564 520 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 THBS1P07996 1170 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 GNAO1P09471 354 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 RPS4Y1P22090 263 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms