RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	SEMA4G	Q9NTN9	838 aa		12.14	□□□□□ -0.47
DDX11-223	ENST00000542838	PTGFRN	Q9P2B2	879 aa		12.14	□□□□□ -0.47
DDX11-223	ENST00000542838	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	12.14	□□□□□ -0.47
DDX11-223	ENST00000542838	MYO10	Q9HD67	2058 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	GLOD5	A6NK44	160 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	DVL2	O14641	736 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	CASC3	O15234	703 aa	Known RBP	12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	EFCAB14	O75071	495 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	ERAL1	O75616	437 aa	Known RBP	12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	GPR176	Q14439	515 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	TRAM2	Q15035	370 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	SMUG1	Q53HV7	270 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	NDUFAF5	Q5TEU4	345 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	AADACL4	Q5VUY2	407 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	UBE3D	Q7Z6J8	389 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	DTX3	Q8N9I9	347 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	OR4Q3	Q8NH05	313 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	C11orf49	Q9H6J7	331 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	SLC35C2	Q9NQQ7	365 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	SLC23A1	Q9UHI7	598 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	SLC13A4	Q9UKG4	626 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	TCF20	Q9UGU0	1960 aa	Known RBP	12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	SPINT1	O43278	529 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	LZTS3	O60299	673 aa	Predicted RBP	12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	HMGN2	P05204	90 aa	Known RBP	12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	GAA	P10253	952 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	PKLR	P30613	574 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	NTS	P30990	170 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	HOXD11	P31277	338 aa	Predicted RBP	12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	SSR2	P43308	183 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	REEP5	Q00765	189 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	ZNF311	Q5JNZ3	666 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	BICRAL	Q6AI39	1079 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	OR4C11	Q6IEV9	310 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	TMEM91	Q6ZNR0	172 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	CCDC28A	Q8IWP9	274 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	DNAJC5G	Q8N7S2	189 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	BBS1	Q8NFJ9	593 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	PIGX	Q8TBF5	258 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	KLK6	Q92876	244 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	PHF21A	Q96BD5	680 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	CAMK1G	Q96NX5	476 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	WASH6P	Q9NQA3	447 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	ASB6	Q9NWX5	421 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	ZFR2	Q9UPR6	939 aa	Known RBP	12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	NCKAP1	Q9Y2A7	1128 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838	KCNE3	Q9Y6H6	103 aa		12.13	□□□□□ -0.47
DDX11-223	ENST00000542838		A0A0G2JPF8	293 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	HNRNPCL2	B2RXH8	293 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	HNRNPCL3	B7ZW38	293 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	KIAA0355	O15063	1070 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	SURF4	O15260	269 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	PAH	P00439	452 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	HNRNPCL4	P0DMR1	293 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	UQCRC1	P31930	480 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ANXA11	P50995	505 aa	Known RBP	12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ATP12A	P54707	1039 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ACSM1	Q08AH1	577 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	EOGT	Q5NDL2	527 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	PIP5KL1	Q5T9C9	394 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	FAM46C	Q5VWP2	391 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	FAM205BP	Q63HN1	556 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	VASN	Q6EMK4	673 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ADCK2	Q7Z695	626 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ZNF764	Q96H86	408 aa	Predicted RBP	12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	C17orf62	Q9BQA9	187 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ZNF649	Q9BS31	505 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	TEX12	Q9BXU0	123 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	DDX31	Q9H8H2	851 aa	Known RBP	12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	H2AFY2	Q9P0M6	372 aa	Predicted RBP	12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	GPR34	Q9UPC5	381 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	LIPT1	Q9Y234	373 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	WNT6	Q9Y6F9	365 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ZSCAN5B	A6NJL1	495 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	FABP7	O15540	132 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	LCMT2	O60294	686 aa	Known RBP	12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	C6	P13671	934 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	OMP	P47874	163 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	TAS2R38	P59533	333 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ST3GAL3	Q11203	375 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	GNA13	Q14344	377 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	TEAD2	Q15562	447 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ANKRD54	Q6NXT1	300 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	VRK2	Q86Y07	508 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	OR8H1	Q8NGG4	311 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	OR52N1	Q8NH53	320 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	CD99L2	Q8TCZ2	262 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ACOT12	Q8WYK0	555 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	C16orf58	Q96GQ5	468 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	ART5	Q96L15	291 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	DIABLO	Q9NR28	239 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	TNFRSF10D	Q9UBN6	386 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	IL20RA	Q9UHF4	553 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	EXOG	Q9Y2C4	368 aa	Known RBP	12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	GPR55	Q9Y2T6	319 aa	Predicted RBP	12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	CSNK1G3	Q9Y6M4	447 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	HEATR5B	Q9P2D3	2071 aa		12.12	□□□□□ -0.47
DDX11-223	ENST00000542838	COL4A3	Q01955	1670 aa		12.12	□□□□□ -0.47

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