RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TP53P04637 393 aaPredicted RBP14.41□□□□□ -0.1
CNOT9-208ENST00000542068 PCSK2P16519 638 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 NCBP2P52298 156 aaKnown RBP eCLIP14.41□□□□□ -0.13e-13■□□□□ 9.5
CNOT9-208ENST00000542068 CHRNEQ04844 493 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 ZNF33BQ06732 778 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 CCDC116Q8IYX3 515 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 ANKRD53Q8N9V6 530 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 OR8D4Q8NGM9 314 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 RIPOR3Q96MK2 946 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 AIF1LQ9BQI0 150 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 KLHL1Q9NR64 748 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 SLC23A1Q9UHI7 598 aa14.41□□□□□ -0.1
CNOT9-208ENST00000542068 FOXE1O00358 373 aaPredicted RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 MID1O15344 667 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 ALPPP05187 535 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 PPP2R1BP30154 601 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 IFNA8P32881 189 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 MLLT3P42568 568 aaPredicted RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 GZMKP49863 264 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 SMSP52788 366 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 PRMT2P55345 433 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 PEX5LQ8IYB4 626 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 OR51G2Q8NGK0 314 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 SPPL3Q8TCT6 385 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 SPRYD4Q8WW59 207 aaPredicted RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 OR5P2Q8WZ92 322 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 PPP1R16AQ96I34 528 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 MSLNLQ96KJ4 702 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 SECISBP2Q96T21 854 aaKnown RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 MED20Q9H944 212 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 SLC9A8Q9Y2E8 581 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 LIMS3P0CW19 117 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 LIMS4P0CW20 117 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 ARSBP15848 533 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 ERP29P30040 261 aaKnown RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 OR3A3P47888 321 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 SRP9P49458 86 aaKnown RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 MNX1P50219 401 aaPredicted RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 PIP5KL1Q5T9C9 394 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 ERN2Q76MJ5 926 aaKnown RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 CLDN22Q8N7P3 220 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 APOBEC4Q8WW27 367 aaKnown RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 TMEM106CQ9BVX2 250 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 ZDHHC5Q9C0B5 715 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 SLC6A17Q9H1V8 727 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 RBFOX1Q9NWB1 397 aaKnown RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 DKK3Q9UBP4 350 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 A8MVJ9 347 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 LANCL1O43813 399 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 HOXB3P14651 431 aaPredicted RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 ELAVL3Q14576 367 aaKnown RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 KLHL22Q53GT1 634 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 HSDL2Q6YN16 418 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 DGLUCYQ7Z3D6 616 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 ZFAND1Q8TCF1 268 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 OMA1Q96E52 524 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 POLDIP3Q9BY77 421 aaKnown RBP14.4□□□□□ -0.1
CNOT9-208ENST00000542068 RHBGQ9H310 441 aa14.4□□□□□ -0.1
CNOT9-208ENST00000542068 CACNA1CQ13936 2221 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 ALPK2Q86TB3 2170 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 A0A087WUU8 490 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 NOS1APO75052 506 aaPredicted RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 ENDOUP21128 410 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 CLDN2P57739 230 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 DCDC1P59894 354 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 STXBP1P61764 594 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 HNRNPA1L2Q32P51 320 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 KLHL12Q53G59 568 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 ZNF628Q5EBL2 1059 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 FAM78AQ5JUQ0 283 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 KHDRBS2Q5VWX1 349 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 SLC27A4Q6P1M0 643 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 VRK2Q86Y07 508 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 FAM26EQ8N5C1 309 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 BEST4Q8NFU0 473 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 OR4M1Q8NGD0 313 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 OR8K5Q8NH50 307 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 METTL2AQ96IZ6 378 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 SIRT3Q9NTG7 399 aaPredicted RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 P2RX2Q9UBL9 471 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 GPR55Q9Y2T6 319 aaPredicted RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 SEC16AO15027 2179 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 GABRPO00591 440 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 SOCS6O14544 535 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 ERI3O43414 337 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 SOD1P00441 154 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 FUT1P19526 365 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 POU3F3P20264 500 aaPredicted RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 CPN2P22792 545 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 KELP23276 732 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 OCLNQ16625 522 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 TMEM201Q5SNT2 666 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 C9orf64Q5T6V5 341 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 YAF2Q8IY57 180 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 OR8H3Q8N146 312 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 HDDC3Q8N4P3 179 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 OR14C36Q8NHC7 312 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 BBS10Q8TAM1 723 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 GDF15Q99988 308 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 ISG20L2Q9H9L3 353 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms