RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 NR5A2O00482 541 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 EPHB6O15197 1021 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 MAGEB2O15479 319 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 TRAPPC3O43617 180 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 N4BP1O75113 896 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 CIAO1O76071 339 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 DFFBO76075 338 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 MYO1DO94832 1006 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PTBP3O95758 552 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 APOC1P02654 83 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 SERPINB2P05120 415 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 CAPN1P07384 714 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 MMP10P09238 476 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PAEPP09466 180 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 FAM228BP0C875 321 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 GPR89BP0CG08 455 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 HSMCR30P0CW71 290 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PRPS2P11908 318 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 F8A1P23610 371 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 ACP1P24666 158 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 CCND2P30279 289 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 SSTR1P30872 391 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 GDI1P31150 447 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 BMI1P35226 326 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 ACAA2P42765 397 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 EIF2B2P49770 351 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 HNMTP50135 292 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 SMSP52788 366 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 SUCLG1P53597 346 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 AIF1P55008 147 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 CDH6P55285 790 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 CARD18P57730 90 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 DCDC1P59894 354 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 SP3Q02447 781 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 TAF10Q12962 218 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PPP1R8Q12972 351 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 CALCOCO2Q13137 446 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 BAMBIQ13145 260 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PLD1Q13393 1074 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 NAB1Q13506 487 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 CAPRIN1Q14444 709 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 ARHGAP19Q14CB8 494 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 FASTKD3Q14CZ7 662 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 TRADDQ15628 312 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 LRRC36Q1X8D7 754 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 ZFP69Q49AA0 526 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 BRMS1LQ5PSV4 323 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 ATAD3BQ5T9A4 648 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 HES5Q5TA89 166 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 DUPD1Q68J44 220 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 ZNF770Q6IQ21 691 aaPredicted RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 ARMCX5Q6P1M9 558 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 CD164L2Q6UWJ8 174 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 NIPA1Q7RTP0 329 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PEX26Q7Z412 305 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 TAF8Q7Z7C8 310 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PRUNE1Q86TP1 453 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 TBC1D10CQ8IV04 446 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 RCOR2Q8IZ40 523 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 CLEC4FQ8N1N0 589 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 UBE2J2Q8N2K1 259 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PRSS35Q8N3Z0 413 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 MARVELD2Q8N4S9 558 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 TBC1D19Q8N5T2 526 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 OR10Q1Q8NGQ4 319 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 OR2T11Q8NH01 316 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 OR4C3Q8NH37 302 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 OR52N5Q8NH56 324 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 RAB3IL1Q8TBN0 382 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 MCOLN3Q8TDD5 553 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PDCD6IPQ8WUM4 868 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 DYRK2Q92630 601 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 SLCO4A1Q96BD0 722 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 GMPPAQ96IJ6 420 aaPredicted RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 MAGED4Q96JG8 741 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PRAC1Q96KF2 57 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 B3GALT6Q96L58 329 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 SAMD8Q96LT4 415 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 ZNF578Q96N58 590 aaPredicted RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 SPATA13Q96N96 652 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 CCT8L2Q96SF2 557 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 TXN2Q99757 166 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 NFKBIZQ9BYH8 718 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 FAM49AQ9H0Q0 323 aaPredicted RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 CPVLQ9H3G5 476 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 SYNDIG1Q9H7V2 258 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 TLE6Q9H808 572 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 GORASP2Q9H8Y8 452 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 GPN1Q9HCN4 374 aaPredicted RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 FGF22Q9HCT0 170 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 RPRD1BQ9NQG5 326 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 ZNF71Q9NQZ8 489 aaPredicted RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 C20orf96Q9NUD7 363 aaPredicted RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 DDX19AQ9NUU7 478 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 ETNK2Q9NVF9 386 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 RCOR3Q9P2K3 495 aaPredicted RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 FAM153AQ9UHL3 310 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 NARFQ9UHQ1 456 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms