RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 CAV1Q03135 178 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 CNEP1R1Q8N9A8 125 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 OR7G2Q8NG99 324 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 ZNF675Q8TD23 568 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 EXOSC8Q96B26 276 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 PIK3IP1Q96FE7 263 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 ZNF845Q96IR2 970 aaPredicted RBP13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 PIGMQ9H3S5 423 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 UBTD1Q9HAC8 227 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 TRPS1Q9UHF7 1281 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 DLGAP4Q9Y2H0 992 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 DSCAMO60469 2012 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 PRR14LQ5THK1 2151 aa13.96□□□□□ -0.18
CLSTN3-213ENST00000541953 SCO2O43819 266 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 CGAP01215 116 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 CLDN20P56880 219 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 LARP4Q71RC2 724 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 CDYL2Q8N8U2 506 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 FADS6Q8N9I5 356 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 TMCO6Q96DC7 493 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 PERPQ96FX8 193 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 ZC3HAV1LQ96H79 300 aaKnown RBP13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 RAB17Q9H0T7 212 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 DSN1Q9H410 356 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 PRODH2Q9UF12 536 aa13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 EIF3LQ9Y262 564 aaKnown RBP13.95□□□□□ -0.18
CLSTN3-213ENST00000541953 SLC22A20A6NK97 555 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 SHISA8B8ZZ34 492 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 MANBAO00462 879 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 SMPD2O60906 423 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 RBP1P09455 135 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 CRYGSP22914 178 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 CHMP24386 653 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 GCKP35557 465 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 UGT2B10P36537 528 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 CD79BP40259 229 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 MC3RP41968 323 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 STX5Q13190 355 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 GAB1Q13480 694 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 ANKRD34AQ69YU3 496 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 AAGABQ6PD74 315 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 P4HA3Q7Z4N8 544 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 YTHDF3Q7Z739 585 aaKnown RBP13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 P3H2Q8IVL5 708 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 OR2M3Q8NG83 312 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 FNDC9Q8TBE3 224 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 PGM2Q96G03 612 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 APIPQ96GX9 242 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 FAM111AQ96PZ2 611 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 PAFAH2Q99487 392 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 LRRC1Q9BTT6 524 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 EBPLQ9BY08 206 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 ACPTQ9BZG2 426 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 CDC42EP4Q9H3Q1 356 aaKnown RBP13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 BRF2Q9HAW0 419 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 PFDN4Q9NQP4 134 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 MED11Q9P086 117 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 NDRG3Q9UGV2 375 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 ADAM21Q9UKJ8 722 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 ZNF780BQ9Y6R6 833 aa13.94□□□□□ -0.18
CLSTN3-213ENST00000541953 INAFM1C9JVW0 142 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 CASKO14936 926 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 SEC14L5O43304 696 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 SMIM24O75264 130 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 ESRRBO95718 433 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 OTCP00480 354 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 THBDP07204 575 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 EVI2BP34910 448 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 HSD17B3P37058 310 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 DIO3P55073 304 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 PSG6Q00889 435 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 GUSBP1Q15486 140 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 ACKR1Q16570 336 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 UNC50Q53HI1 259 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 C10orf62Q5T681 223 aaPredicted RBP13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 SLC44A2Q8IWA5 706 aaPredicted RBP13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 LRRC75A-AS1Q8N1F1 130 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 ZNF610Q8N9Z0 462 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 UHMK1Q8TAS1 419 aaKnown RBP13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 NUDT8Q8WV74 236 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 IGFBPL1Q8WX77 278 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 TMEM237Q96Q45 408 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 KCNA7Q96RP8 456 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 CCL19Q99731 98 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 PIP5K1AQ99755 562 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 MED18Q9BUE0 208 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 C1QTNF3Q9BXJ4 246 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 PINK1Q9BXM7 581 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 MCM8Q9UJA3 840 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 MRPS18CQ9Y3D5 142 aaKnown RBP13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 ZNF337Q9Y3M9 751 aa13.93□□□□□ -0.18
CLSTN3-213ENST00000541953 COL6A5A8TX70 2615 aa13.92□□□□□ -0.18
CLSTN3-213ENST00000541953 OR2M5A3KFT3 312 aa13.92□□□□□ -0.18
CLSTN3-213ENST00000541953 TRIM49D1C9J1S8 452 aa13.92□□□□□ -0.18
CLSTN3-213ENST00000541953 PCDH7O60245 1069 aa13.92□□□□□ -0.18
CLSTN3-213ENST00000541953 FADS1O60427 444 aa13.92□□□□□ -0.18
CLSTN3-213ENST00000541953 GUCY1B2O75343 617 aa13.92□□□□□ -0.18
CLSTN3-213ENST00000541953 AQP8O94778 261 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms