RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PNNQ9H307 717 aaKnown RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 MYOZ2Q9NPC6 264 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 MAN2C1Q9NTJ4 1040 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 ZFP57Q9NU63 452 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 RDH8Q9NYR8 311 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 TECRQ9NZ01 308 aaKnown RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 ZNF175Q9Y473 711 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 MRC1P22897 1456 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 GREB1LQ9C091 1923 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 A0A0U1RQV5 110 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 A0A1B0GUL7 405 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 MEI4A8MW99 385 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 ZNF195O14628 629 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 SH2D1BO14796 132 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 P2RX6O15547 441 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 TSC22D2O75157 780 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 ANXA4P09525 319 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-217ENST00000541578 ZCCHC18P0CG32 403 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 RPS2P15880 293 aaKnown RBP3.65□□□□□ -1.83
SNHG1-217ENST00000541578 TSPAN8P19075 237 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 IL4RP24394 825 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 MARK3P27448 753 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 HTR2AP28223 471 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 GPR183P32249 361 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 RPL9P32969 192 aaKnown RBP3.65□□□□□ -1.83
SNHG1-217ENST00000541578 ADRA1AP35348 466 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 SOX3P41225 446 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 PTGFRP43088 359 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 FHITP49789 147 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 PAX9P55771 341 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 SPIBQ01892 262 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 DMTNQ08495 405 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 RBBP4Q09028 425 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 KLF5Q13887 457 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-217ENST00000541578 MAJINQ3KP22 176 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 ADPRMQ3LIE5 342 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 LRIT3Q3SXY7 679 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 SPANXN4Q5MJ08 99 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 DCAF12Q5T6F0 453 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 CENPPQ6IPU0 288 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 SLC25A47Q6Q0C1 308 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 C19orf48Q6RUI8 117 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 DPY19L2P2Q6ZN68 376 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 LRRC70Q7Z2Q7 622 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 LUZP1Q86V48 1076 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 FAM131BQ86XD5 332 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 HOGA1Q86XE5 327 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 ZDHHC21Q8IVQ6 265 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 ZNF843Q8N446 348 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 DDHD1Q8NEL9 900 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 OR10V1Q8NGI7 309 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 OR2T11Q8NH01 316 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 CD99L2Q8TCZ2 262 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 SMAP2Q8WU79 429 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-217ENST00000541578 C2orf48Q96LS8 159 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 RAB40CQ96S21 281 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 TCHPQ9BT92 498 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 DCTN5Q9BTE1 182 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 FUCA2Q9BTY2 467 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 PUS3Q9BZE2 481 aaKnown RBP3.65□□□□□ -1.83
SNHG1-217ENST00000541578 DCTPP1Q9H773 170 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 LRRC40Q9H9A6 602 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 ZNF334Q9HCZ1 680 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-217ENST00000541578 DCAF16Q9NXF7 216 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-217ENST00000541578 P2RX2Q9UBL9 471 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 EIF3KQ9UBQ5 218 aaKnown RBP3.65□□□□□ -1.83
SNHG1-217ENST00000541578 FOXJ3Q9UPW0 622 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 SLC6A5Q9Y345 797 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 PSME4Q14997 1843 aa3.65□□□□□ -1.83
SNHG1-217ENST00000541578 SIPA1L3O60292 1781 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SNED1Q8TER0 1413 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 IGHV4-4A0A075B6R2 117 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SERINC4A6NH21 518 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SHISA7A6NL88 538 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 WASH3PC4AMC7 463 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 FAM72CH0Y354 149 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 H3BTX0 84 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 K7EQM0 130 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 UBXN8O00124 270 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 INPP4BO15327 924 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 LANCL1O43813 399 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 PCDH7O60245 1069 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 MAGEC1O60732 1142 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 LRCH4O75427 683 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 MTRF1O75570 445 aaKnown RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 OR4F21O95013 312 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 APBB3O95704 486 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 PAK4O96013 591 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SLC35G4P0C7Q5 338 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 FAM157CP0CG43 387 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 CEBPBP17676 345 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 GLRA1P23415 457 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 PSMA2P25787 234 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 CALML3P27482 149 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 PTPN6P29350 595 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 OTX2P32243 289 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 CHI3L1P36222 383 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 DCTP40126 519 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms