RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ZNF605Q86T29 641 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 LSRQ86X29 649 aaPredicted RBP22.81■■□□□ 1.24
TTC3-225ENST00000540756 PPP1R3BQ86XI6 285 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 CLIP4Q8N3C7 705 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 SUMF1Q8NBK3 374 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 C16orf52Q8NHV5 167 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 HOXB13Q92826 284 aaPredicted RBP22.81■■□□□ 1.24
TTC3-225ENST00000540756 VSTM2LQ96N03 204 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 ZNF347Q96SE7 839 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 STACQ99469 402 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 RBM4BQ9BQ04 359 aaKnown RBP22.81■■□□□ 1.24
TTC3-225ENST00000540756 RBM4Q9BWF3 364 aaKnown RBP22.81■■□□□ 1.24
TTC3-225ENST00000540756 PRR14Q9BWN1 585 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 OR10A5Q9H207 317 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 AKIRIN1Q9H9L7 192 aaPredicted RBP22.81■■□□□ 1.24
TTC3-225ENST00000540756 ACER3Q9NUN7 267 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 PCDHGB3Q9Y5G1 929 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 TNFRSF11BO00300 401 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 DPM1O60762 260 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 COQ9O75208 318 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 DNAJB5O75953 348 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 THRBP10828 461 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 ITGA2P17301 1181 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 RFX3P48380 749 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 MAPK10P53779 464 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 CLDN6P56747 220 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 MAPK14Q16539 360 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 ZCCHC12Q6PEW1 402 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 NPSR1Q6W5P4 371 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 GALNT5Q7Z7M9 940 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 ZNF615Q8N8J6 731 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 OR4C15Q8NGM1 316 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 OR6T1Q8NGN1 323 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 RASSF5Q8WWW0 418 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 RMND5BQ96G75 393 aaPredicted RBP22.81■■□□□ 1.24
TTC3-225ENST00000540756 EPYCQ99645 322 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 ZNF350Q9GZX5 532 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 TOR3AQ9H497 397 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 USE1Q9NZ43 259 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 CALML5Q9NZT1 146 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 IFT80Q9P2H3 777 aaPredicted RBP22.81■■□□□ 1.24
TTC3-225ENST00000540756 KCNE5Q9UJ90 142 aa22.81■■□□□ 1.24
TTC3-225ENST00000540756 NKX2-2O95096 273 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 LGI1O95970 557 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 POLR2IP36954 125 aaKnown RBP22.8■■□□□ 1.24
TTC3-225ENST00000540756 SPEM2Q0P670 501 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 NSDHLQ15738 373 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 EXOC3L2Q2M3D2 409 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 FAAH2Q6GMR7 532 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 BMPERQ8N8U9 685 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 CHDHQ8NE62 594 aaPredicted RBP22.8■■□□□ 1.24
TTC3-225ENST00000540756 OR52P1PQ8NH57 321 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 SENP5Q96HI0 755 aaPredicted RBP22.8■■□□□ 1.24
TTC3-225ENST00000540756 NR1H4Q96RI1 486 aaPredicted RBP22.8■■□□□ 1.24
TTC3-225ENST00000540756 MBOAT4Q96T53 435 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 SPATA5L1Q9BVQ7 753 aa22.8■■□□□ 1.24
TTC3-225ENST00000540756 MKKSQ9NPJ1 570 aaPredicted RBP22.8■■□□□ 1.24
TTC3-225ENST00000540756 FAM32AQ9Y421 112 aaKnown RBP22.8■■□□□ 1.24
TTC3-225ENST00000540756 PEX12O00623 359 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 PCDH17O14917 1159 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 ADAMDEC1O15204 470 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 HPRP00739 348 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 GP1BAP07359 652 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 ZNF806P0C7X5 589 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 RHCEP18577 417 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 PIGAP37287 484 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 NKAIN1Q4KMZ8 207 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 OFCC1Q8IZS5 231 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 DHRSXQ8N5I4 330 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 STT3BQ8TCJ2 826 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 LMF2Q9BU23 707 aaKnown RBP22.79■■□□□ 1.24
TTC3-225ENST00000540756 ANKRD60Q9BZ19 345 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 GABARAPL1Q9H0R8 117 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 HCN4Q9Y3Q4 1203 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 OTOGLQ3ZCN5 2332 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 COL5A1P20908 1838 aaPredicted RBP22.79■■□□□ 1.24
TTC3-225ENST00000540756 KCNK2O95069 426 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 IGKV1D-16P01601 117 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 LYNP07948 512 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 ARHGDIAP52565 204 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 PIN1Q13526 163 aaPredicted RBP22.79■■□□□ 1.24
TTC3-225ENST00000540756 NPTX1Q15818 432 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 CLPPQ16740 277 aaPredicted RBP22.79■■□□□ 1.24
TTC3-225ENST00000540756 LANCL3Q6ZV70 420 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 PINK1Q9BXM7 581 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 MTHFD2LQ9H903 347 aaPredicted RBP22.79■■□□□ 1.24
TTC3-225ENST00000540756 CTPS2Q9NRF8 586 aa22.79■■□□□ 1.24
TTC3-225ENST00000540756 EP300Q09472 2414 aaPredicted RBP22.79■■□□□ 1.24
TTC3-225ENST00000540756 TCRBV16S1A1N1A0A5B0 115 aa22.78■■□□□ 1.24
TTC3-225ENST00000540756 PRAMEF2O60811 474 aa22.78■■□□□ 1.24
TTC3-225ENST00000540756 ZNF28P17035 718 aa22.78■■□□□ 1.24
TTC3-225ENST00000540756 POU6F2P78424 691 aaPredicted RBP22.78■■□□□ 1.24
TTC3-225ENST00000540756 ADARB1P78563 741 aaKnown RBP22.78■■□□□ 1.24
TTC3-225ENST00000540756 HOXC5Q00444 222 aa22.78■■□□□ 1.24
TTC3-225ENST00000540756 ZNF385CQ66K41 422 aaPredicted RBP22.78■■□□□ 1.24
TTC3-225ENST00000540756 ITPAQ9BY32 194 aa22.78■■□□□ 1.24
TTC3-225ENST00000540756 OR8D2Q9GZM6 311 aa22.78■■□□□ 1.24
TTC3-225ENST00000540756 SATB2Q9UPW6 733 aa22.78■■□□□ 1.24
TTC3-225ENST00000540756 TPST2O60704 377 aa22.77■■□□□ 1.24
TTC3-225ENST00000540756 STX11O75558 287 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms