RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 HEMK1Q9Y5R4 338 aaPredicted RBP13.25□□□□□ -0.29
CYB561A3-216ENST00000540755 PTPRQQ9UMZ3 2332 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 SAC3D1A6NKF1 404 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 VSTM2BA6NLU5 285 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 MEN1O00255 615 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 DYRK3O43781 588 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 DPM1O60762 260 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 ALBP02768 609 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 CYC1P08574 325 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 ZGLP1P0C6A0 271 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF26P17031 533 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 TNNI3P19429 210 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 SSTR4P31391 388 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 KCNJ5P48544 419 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 VLDLRP98155 873 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF155Q12901 538 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNHIT3Q15649 155 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 COL28A1Q2UY09 1125 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 IQCCQ4KMZ1 466 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 SFT2D3Q587I9 215 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 OVCH1Q7RTY7 1134 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 WDR53Q7Z5U6 358 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 TMEM151BQ8IW70 566 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 SMYD1Q8NB12 490 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 SPPL2AQ8TCT8 520 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 PTPMT1Q8WUK0 201 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 LIN37Q96GY3 246 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 VPS50Q96JG6 964 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 VSTM2LQ96N03 204 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 COL21A1Q96P44 957 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 CIB1Q99828 191 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 CNPPD1Q9BV87 410 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 OR10A5Q9H207 317 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 SLC38A1Q9H2H9 487 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 FOLH1BQ9HBA9 442 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 THSD1Q9NS62 852 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 SLC39A1Q9NY26 324 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 SEC14L3Q9UDX4 400 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 PRODH2Q9UF12 536 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 MKL2Q9ULH7 1088 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 RAB26Q9ULW5 256 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 LOXL2Q9Y4K0 774 aa13.24□□□□□ -0.29
CYB561A3-216ENST00000540755 HRKO00198 91 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ACOX3O15254 700 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 CLPSP04118 112 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 GUSBP08236 651 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 CDK4P11802 303 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 AGXTP21549 392 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 PGDP52209 483 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 AQP4P55087 323 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 RAB15P59190 212 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 KCNC4Q03721 635 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 CHRNEQ04844 493 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 NSDHLQ15738 373 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 DUSP7Q16829 419 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ISXQ2M1V0 245 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 MLIPQ5VWP3 458 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 AP1ARQ63HQ0 302 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 OR2T5Q6IEZ7 315 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 PPP4R4Q6NUP7 873 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 FRRS1Q6ZNA5 592 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ZBTB49Q6ZSB9 765 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 LAPTM4BQ86VI4 370 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 TMPRSS12Q86WS5 348 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF615Q8N8J6 731 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 COX18Q8N8Q8 333 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 OR2T29Q8NH02 315 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 FBXL20Q96IG2 436 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF354BQ96LW1 612 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 SDF2Q99470 211 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF350Q9GZX5 532 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 COQ10BQ9H8M1 238 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 PNO1Q9NRX1 252 aaKnown RBP13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 OAZ3Q9UMX2 235 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ABCG2Q9UNQ0 655 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 hCG_2039718K7EN88 272 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 GNGT2O14610 69 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ALPPP05187 535 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 FESP07332 822 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 UQCRBP14927 111 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF23P17027 643 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ITGA2P17301 1181 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 POU6F2P78424 691 aaPredicted RBP13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 PSG6Q00889 435 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 MED21Q13503 144 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 DCST2Q5T1A1 773 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 TYW3Q6IPR3 259 aaKnown RBP13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 MRPL14Q6P1L8 145 aaKnown RBP13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 PRSS58Q8IYP2 241 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 SVOPLQ8N434 492 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 NINQ8N4C6 2090 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 GPR32P1Q8NGA4 272 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 OR14A16Q8NHC5 309 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 GPR151Q8TDV0 419 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 APOBEC4Q8WW27 367 aaKnown RBP13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 PROX1Q92786 737 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 PMM1Q92871 262 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 DAZLQ92904 295 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms