RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PPP1R8Q12972 351 aaKnown RBP2.28□□□□□ -2.04
MDM2-227ENST00000540709 CLPPQ16740 277 aaPredicted RBP2.28□□□□□ -2.04
MDM2-227ENST00000540709 ZNF674Q2M3X9 581 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 ZNF528Q3MIS6 628 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 SLC39A12Q504Y0 691 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 AGBL2Q5U5Z8 902 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 PRR5LQ6MZQ0 368 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 TRPM8Q7Z2W7 1104 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 SLC22A16Q86VW1 577 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 CCDC170Q8IYT3 715 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 ST7LQ8TDW4 575 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 TMEM37Q8WXS4 190 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 DNAJA3Q96EY1 480 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 CCDC43Q96MW1 224 aaKnown RBP2.28□□□□□ -2.04
MDM2-227ENST00000540709 ACCSQ96QU6 501 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 DPH7Q9BTV6 452 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 NACA2Q9H009 215 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 Q9H3A6 140 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 FAM124BQ9H5Z6 455 aaPredicted RBP2.28□□□□□ -2.04
MDM2-227ENST00000540709 HOMER3Q9NSC5 361 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 ZNF221Q9UK13 617 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 ZNF175Q9Y473 711 aa2.28□□□□□ -2.04
MDM2-227ENST00000540709 IGLV3-16A0A075B6K0 115 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 C5orf51A6NDU8 294 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 PDLIM1O00151 329 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 FMO6PO60774 539 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 ZNF254O75437 659 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 SYNGR4O95473 234 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 TMOD1P28289 359 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 POU3F4P49335 361 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 NUMBP49757 651 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 EPC2Q52LR7 807 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 TFDP3Q5H9I0 405 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 LGSNQ5TDP6 509 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 DPY19L2P2Q6ZN68 376 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 ZNF410Q86VK4 478 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 SERPINA12Q8IW75 414 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 CHCHD4Q8N4Q1 142 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 FNDC8Q8TC99 324 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 PTP4A1Q93096 173 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 IL22RA2Q969J5 263 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 DESI2Q9BSY9 194 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 CNPY3Q9BT09 278 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 GLT8D2Q9H1C3 349 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 EXOSC3Q9NQT5 275 aaKnown RBP2.27□□□□□ -2.05
MDM2-227ENST00000540709 ZNF331Q9NQX6 463 aaPredicted RBP2.27□□□□□ -2.05
MDM2-227ENST00000540709 COPS7AQ9UBW8 275 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 BARX2Q9UMQ3 279 aaPredicted RBP2.27□□□□□ -2.05
MDM2-227ENST00000540709 MEGF6O75095 1541 aa2.27□□□□□ -2.05
MDM2-227ENST00000540709 PTPRUQ92729 1446 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 GRIN2DO15399 1336 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 LRIT2A6NDA9 550 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 TMEM110-MUSTN1A8MSY1 372 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 HTATSF1O43719 755 aaKnown RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 SDC1P18827 310 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 GABRR1P24046 479 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 MAT2AP31153 395 aaKnown RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 NPY2RP49146 381 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 BTG3Q14201 252 aaPredicted RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 CAMK4Q16566 473 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 CARTPTQ16568 116 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 C2orf76Q3KRA6 126 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 SBK1Q52WX2 424 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 CMPK2Q5EBM0 449 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 METTL11BQ5VVY1 283 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 TMEM110Q86TL2 294 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 CENPSQ8N2Z9 138 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 RNASE8Q8TDE3 154 aaKnown RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 ANKRD49Q8WVL7 239 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 DLX4Q92988 240 aaPredicted RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 PLEKHF1Q96S99 279 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 NICN1Q9BSH3 213 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 TM2D1Q9BX74 207 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 TEX13AQ9BXU3 409 aaPredicted RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 SLC25A39Q9BZJ4 359 aaPredicted RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 ABCG8Q9H221 673 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 ALG9Q9H6U8 611 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 PATZ1Q9HBE1 687 aaKnown RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 HMG20BQ9P0W2 317 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 LHX3Q9UBR4 397 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 TRMT6Q9UJA5 497 aaKnown RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 PURGQ9UJV8 347 aaKnown RBP2.26□□□□□ -2.05
MDM2-227ENST00000540709 FKBP7Q9Y680 259 aa2.26□□□□□ -2.05
MDM2-227ENST00000540709 ARID1AO14497 2285 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 TCP11X1B4DZS4 312 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 ABCD4O14678 606 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 SDC3O75056 442 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 MMP23AO75900 390 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 IGSF6O95976 241 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 PNPP00491 289 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 HPNP05981 417 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 PGK2P07205 417 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 NF2P35240 595 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 MAGEA4P43358 317 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 PITPNBP48739 271 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 CNN1P51911 297 aaKnown RBP2.25□□□□□ -2.05
MDM2-227ENST00000540709 CASP9P55211 416 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 LINC00315P59091 139 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 PKN2Q16513 984 aaKnown RBP2.25□□□□□ -2.05
MDM2-227ENST00000540709 CCDC14Q49A88 953 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms