RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 SENP1Q9P0U3 644 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 STOML1Q9UBI4 398 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 VPS29Q9UBQ0 182 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 PCTPQ9UKL6 214 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 NFU1Q9UMS0 254 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 OR10H1Q9Y4A9 318 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 EXPH5Q8NEV8 1989 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 TRIM64A6NGJ6 449 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 TRIM64BA6NI03 449 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 INAFM1C9JVW0 142 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 SIAH2O43255 324 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 TSPAN2O60636 221 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 TNFRSF21O75509 655 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 CNOT4O95628 575 aaKnown RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 PDYNP01213 254 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 ALDOAP04075 364 aaKnown RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 CT45A8P0DMV1 189 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 CT45A9P0DMV2 189 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 CD8BP10966 210 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 HK1P19367 917 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 TBXA2RP21731 343 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 KIR2DL2P43627 348 aaPredicted RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 CLK3P49761 638 aaKnown RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 RPS3AP61247 264 aaKnown RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 GALNT1Q10472 559 aaPredicted RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 TRAF3Q13114 568 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 TSNAXIP1Q2TAA8 658 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 CT45A2Q5DJT8 189 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 FAM180BQ6P0A1 224 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 C1orf52Q8N6N3 182 aaKnown RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 SPATA3Q8NHX4 192 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 TMEM171Q8WVE6 324 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 CAVIN3Q969G5 261 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF681Q96N22 645 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 PINK1Q9BXM7 581 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 KLHL4Q9C0H6 718 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 STMN4Q9H169 189 aaPredicted RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 DSN1Q9H410 356 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 CXorf56Q9H5V9 222 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 ZBTB26Q9HCK0 441 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 FARSBQ9NSD9 589 aaKnown RBP11.27□□□□□ -0.61
COPS7A-211ENST00000540408 PROCRQ9UNN8 238 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF175Q9Y473 711 aa11.27□□□□□ -0.61
COPS7A-211ENST00000540408 MED12LQ86YW9 2145 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 HMX2A2RU54 273 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 TMCC2O75069 709 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 FCGR2AP12318 317 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 PPP3CBP16298 524 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 MPIP34949 423 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 PTH2RP49190 550 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 CORO7P57737 925 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 DUSP2Q05923 314 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 GANABQ14697 944 aaKnown RBP11.26□□□□□ -0.61
COPS7A-211ENST00000540408 HEPACAMQ14CZ8 416 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 SGCBQ16585 318 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF628Q5EBL2 1059 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF550Q7Z398 422 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 SLC44A2Q8IWA5 706 aaPredicted RBP11.26□□□□□ -0.61
COPS7A-211ENST00000540408 PLD6Q8N2A8 252 aaKnown RBP11.26□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF610Q8N9Z0 462 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 FIG4Q92562 907 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 KAT2AQ92830 837 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 GFM2Q969S9 779 aaKnown RBP11.26□□□□□ -0.61
COPS7A-211ENST00000540408 EFHD2Q96C19 240 aaPredicted RBP11.26□□□□□ -0.61
COPS7A-211ENST00000540408 MTBPQ96DY7 904 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 NSUN5Q96P11 429 aaKnown RBP11.26□□□□□ -0.61
COPS7A-211ENST00000540408 PIGQQ9BRB3 760 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 PRRG4Q9BZD6 226 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 RNF122Q9H9V4 155 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 FOLH1BQ9HBA9 442 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 TRPS1Q9UHF7 1281 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 MCM8Q9UJA3 840 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 MED12Q93074 2177 aa11.26□□□□□ -0.61
COPS7A-211ENST00000540408 GNG14A0A1W2PPG7 69 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 SEC14L5O43304 696 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 SCO2O43819 266 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 CGAP01215 116 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 KRT6AP02538 564 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 KRT6BP04259 564 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 COL6A2P12110 1019 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 HSD3B1P14060 373 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 HSD3B2P26439 372 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 EVI2BP34910 448 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 KRT6CP48668 564 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 GAS1P54826 345 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 NR1H2P55055 460 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 B3GALT5-AS1P59052 145 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 OCRLQ01968 901 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 GUCY2DQ02846 1103 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 C2orf54Q08AI8 447 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 PON3Q15166 354 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 BEX5Q5H9J7 111 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 SH2D4BQ5SQS7 431 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 ANKRD34AQ69YU3 496 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 FAM214BQ7L5A3 538 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 CXXC5Q7LFL8 322 aaKnown RBP11.25□□□□□ -0.61
COPS7A-211ENST00000540408 OR9A2Q8NGT5 310 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 UHMK1Q8TAS1 419 aaKnown RBP11.25□□□□□ -0.61
COPS7A-211ENST00000540408 EXOSC8Q96B26 276 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms