RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 GK2Q14410 553 aaPredicted RBP2.72□□□□□ -1.97
CCDC7-209ENST00000539197 CYB5R2Q6BCY4 276 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 TSEN54Q7Z6J9 526 aaKnown RBP2.72□□□□□ -1.97
CCDC7-209ENST00000539197 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.72□□□□□ -1.97
CCDC7-209ENST00000539197 MCOLN2Q8IZK6 566 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 OR52J3Q8NH60 311 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 HIST1H2ACQ93077 130 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 ATP6V1E2Q96A05 226 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 RAB39BQ96DA2 213 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 HCAR1Q9BXC0 346 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 OSBPL8Q9BZF1 889 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 CCSER1Q9C0I3 900 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 GLT8D2Q9H1C3 349 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 PNPLA3Q9NST1 481 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 ZNF282Q9UDV7 671 aaPredicted RBP2.72□□□□□ -1.97
CCDC7-209ENST00000539197 PSG11Q9UQ72 335 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 ENTPD4Q9Y227 616 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 OR7A17O14581 309 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 RANBP6O60518 1105 aaKnown RBP2.71□□□□□ -1.98
CCDC7-209ENST00000539197 NOL4O94818 638 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 APRTP07741 180 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 GLULP15104 373 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 ZNF18P17022 549 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 GABRR1P24046 479 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 NPRL3Q12980 569 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 CD226Q15762 336 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 AARDQ4LEZ3 155 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 NKAIN2Q5VXU1 208 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 DCAF4L2Q8NA75 395 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 OR10H4Q8NGA5 316 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 SLC35E1Q96K37 410 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 TSPY26PQ9H489 355 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 NECAP2Q9NVZ3 263 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 RPH3AQ9Y2J0 694 aaPredicted RBP2.71□□□□□ -1.98
CCDC7-209ENST00000539197 WSB1Q9Y6I7 421 aa2.71□□□□□ -1.98
CCDC7-209ENST00000539197 SLC7A4O43246 635 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 CYP11B1P15538 503 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 MARCKSP29966 332 aaPredicted RBP2.7□□□□□ -1.98
CCDC7-209ENST00000539197 SMC1AQ14683 1233 aaKnown RBP2.7□□□□□ -1.98
CCDC7-209ENST00000539197 ZIC1Q15915 447 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 MEDAGQ5VYS4 303 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 TMEM270Q6UE05 265 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 C10orf53Q8N6V4 93 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 ARIH2OSQ8N7S6 290 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 MLKLQ8NB16 471 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 LHX4Q969G2 390 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 APOOQ9BUR5 198 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 CARD9Q9H257 536 aa2.7□□□□□ -1.98
CCDC7-209ENST00000539197 ZNF223Q9UK11 482 aaPredicted RBP2.7□□□□□ -1.98
CCDC7-209ENST00000539197 SERPINE3A8MV23 424 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 ARPC1BO15143 372 aaKnown RBP2.69□□□□□ -1.98
CCDC7-209ENST00000539197 CD5P06127 495 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 FCARP24071 287 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 CTNNA1P35221 906 aaKnown RBP2.69□□□□□ -1.98
CCDC7-209ENST00000539197 NOP14P78316 857 aaKnown RBP2.69□□□□□ -1.98
CCDC7-209ENST00000539197 CCZ1BP86790 482 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 CCZ1P86791 482 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-209ENST00000539197 GALK2Q01415 458 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 ZNF85Q03923 595 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 EIF2B1Q14232 305 aaKnown RBP2.69□□□□□ -1.98
CCDC7-209ENST00000539197 MORF4L2Q15014 288 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 ZNF630Q2M218 657 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-209ENST00000539197 ATRAIDQ6UW56 229 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 TOM1L2Q6ZVM7 507 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 CCDC91Q7Z6B0 441 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 KRT77Q7Z794 578 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 RANBP3LQ86VV4 465 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-209ENST00000539197 COLGALT1Q8NBJ5 622 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 MARCH1Q8TCQ1 289 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 GPR137Q96N19 417 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 TSPAN18Q96SJ8 248 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 TSSK1BQ9BXA7 367 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 MRPL9Q9BYD2 267 aaKnown RBP2.69□□□□□ -1.98
CCDC7-209ENST00000539197 TRPV6Q9H1D0 765 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 VCXQ9H320 206 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 SYNJ2O15056 1496 aa2.69□□□□□ -1.98
CCDC7-209ENST00000539197 HTATSF1O43719 755 aaKnown RBP2.68□□□□□ -1.98
CCDC7-209ENST00000539197 HSF2BPO75031 334 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 AKAP3O75969 853 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 PGK1P00558 417 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 AREGP15514 252 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 MUTP22033 750 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 KIAA1024LP59773 190 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 HAND2P61296 217 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 GPNMBQ14956 572 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 LRRC31Q6UY01 552 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 TRPM8Q7Z2W7 1104 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 SLC22A16Q86VW1 577 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 CCDC170Q8IYT3 715 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 NKAIN3Q8N8D7 197 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 ST7LQ8TDW4 575 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 BCL2L2Q92843 193 aaPredicted RBP2.68□□□□□ -1.98
CCDC7-209ENST00000539197 C5orf30Q96GV9 206 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 ACCSQ96QU6 501 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 NICN1Q9BSH3 213 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 RSPO3Q9BXY4 272 aaPredicted RBP2.68□□□□□ -1.98
CCDC7-209ENST00000539197 OR51J1Q9H342 316 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 COPS7AQ9UBW8 275 aa2.68□□□□□ -1.98
CCDC7-209ENST00000539197 IGKV1D-17A0A075B6S4 117 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 TRBV7-9A0A0J9YWB2 115 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms