RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 GIMAP1Q8WWP7 306 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 MRPS31Q92665 395 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 FOXJ1Q92949 421 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 REG4Q9BYZ8 158 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 SMG9Q9H0W8 520 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 SERHL2Q9H4I8 314 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 MFSD2BA6NFX1 497 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 SSNA1O43805 119 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 ZNF821O75541 412 aaPredicted RBP17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 IGHA1P01876 353 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 GLULP15104 373 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 SPINT3P49223 89 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 UAP1L1Q3KQV9 507 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 FAM180BQ6P0A1 224 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 MMP21Q8N119 569 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 FTMTQ8N4E7 242 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 EFCAB11Q9BUY7 163 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 LINC00597Q9H2U6 94 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 CDCP1Q9H5V8 836 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 HCN3Q9P1Z3 774 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 LIPT1Q9Y234 373 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 SESN1Q9Y6P5 492 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 TMEM202A6NGA9 273 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 G3V3Q6 166 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 HMGN4O00479 90 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 H2AFB2P0C5Z0 115 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 SHC2P98077 582 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 CNTN1Q12860 1018 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 ZNF273Q14593 569 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 TMEM44Q2T9K0 475 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 TUSC1Q2TAM9 212 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 NHLRC3Q5JS37 347 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 TECPR1Q7Z6L1 1165 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 SOCS4Q8WXH5 440 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 DACT3Q96B18 629 aaPredicted RBP17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 TMEM169Q96HH4 297 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 TREX2Q9BQ50 279 aaPredicted RBP17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 ZNF436Q9C0F3 470 aaPredicted RBP17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 CD84Q9UIB8 345 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 TMEM5Q9Y2B1 443 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 PPIL1Q9Y3C6 166 aa17.48■□□□□ 0.39
SFSWAP-207ENST00000538548 A0A1B0GVC2 190 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 A6NIN4 97 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 DRD2P14416 443 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 C4BPBP20851 252 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 HOXD10P28358 340 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 SYTL3Q4VX76 610 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 ZNF322Q6U7Q0 402 aaPredicted RBP17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 COMTD1Q86VU5 262 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 KLBQ86Z14 1044 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 OR2AP1Q8NGE2 309 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 OR6M1Q8NGM8 313 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 OR8D4Q8NGM9 314 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 OR5P2Q8WZ92 322 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 FBXW5Q969U6 566 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 SGTBQ96EQ0 304 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 WDR34Q96EX3 536 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 ACTR6Q9GZN1 396 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 GLS2Q9UI32 602 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 POMT2Q9UKY4 750 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 PPIEQ9UNP9 301 aaKnown RBP17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 RASD1Q9Y272 281 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 EXOGQ9Y2C4 368 aaKnown RBP17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 SLC9A8Q9Y2E8 581 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 NPC1O15118 1278 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 RNF13O43567 381 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 PRKAR2AP13861 404 aaKnown RBP17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 ZP1P60852 638 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 BDH1Q02338 343 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 SMARCD3Q6STE5 483 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 BTN2A1Q7KYR7 527 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 C6orf120Q7Z4R8 191 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 ZNF687Q8N1G0 1237 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 OR52H1Q8NGJ2 320 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 TMEM159Q96B96 161 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 ECHDC3Q96DC8 303 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 TMEM168Q9H0V1 697 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 SLAMF7Q9NQ25 335 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 MED9Q9NWA0 146 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 MARK1Q9P0L2 795 aa17.47■□□□□ 0.39
SFSWAP-207ENST00000538548 CDH23Q9H251 3354 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 CARNS1A5YM72 827 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 OR2AG2A6NM03 316 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 ATG13O75143 517 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 TM4SF4P48230 202 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 AADACL4Q5VUY2 407 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 WASH2PQ6VEQ5 465 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 TFAP2EQ6VUC0 442 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 OVCH2Q7RTZ1 564 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 RTN4RL1Q86UN2 441 aaPredicted RBP17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 SIAH3Q8IW03 269 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 BEST4Q8NFU0 473 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 RPLP0P6Q8NHW5 317 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 YIPF5Q969M3 257 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 PRRC1Q96M27 445 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 NEUROD4Q9HD90 331 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 EMC3Q9P0I2 261 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 KRBOX1C9JBD0 128 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 DUSP11O75319 330 aaKnown RBP17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 TOXO94900 526 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms