RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 HPCAP84074 193 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 TARDBPQ13148 414 aaKnown RBP eCLIP18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 NCF4Q15080 339 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 SFT2D3Q587I9 215 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 OGFRL1Q5TC84 451 aaPredicted RBP18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 TYW3Q6IPR3 259 aaKnown RBP18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 NPSR1Q6W5P4 371 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 TIPARPQ7Z3E1 657 aaKnown RBP18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 GPR32P1Q8NGA4 272 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 OR4N2Q8NGD1 307 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 CENPNQ96H22 339 aaPredicted RBP18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 ITPAQ9BY32 194 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 PRODH2Q9UF12 536 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 NXT1Q9UKK6 140 aaKnown RBP18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 ABCG2Q9UNQ0 655 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 SH3GLB1Q9Y371 365 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 SDK2Q58EX2 2172 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 DCHS1Q96JQ0 3298 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 C9J4A7 227 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 hCG_2039718K7EN88 272 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 DLGAP3O95886 979 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 CST1P01037 141 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 LDLRP01130 860 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 CAPNS1P04632 268 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 POU6F2P78424 691 aaPredicted RBP18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 NNATQ16517 81 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 IQCCQ4KMZ1 466 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 FIGNL1Q6PIW4 674 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 ICA1LQ8NDH6 482 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 SPPL2AQ8TCT8 520 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 NUDT9Q9BW91 350 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 ZNF350Q9GZX5 532 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 NTN4Q9HB63 628 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 FOXJ2Q9P0K8 574 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 WDR45Q9Y484 360 aa18.09■□□□□ 0.49
EFCAB11-202ENST00000538485 PRKNO60260 465 aaPredicted RBP18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 SOX30O94993 753 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 KCNK2O95069 426 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 FABP3P05413 133 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 FESP07332 822 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 KCNJ5P48544 419 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 GPR143P51810 404 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 PUM1Q14671 1186 aaKnown RBP eCLIP18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 IFI44LQ53G44 452 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 TMEM164Q5U3C3 297 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 TMEM205Q6UW68 189 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 ZSCAN1Q8NBB4 408 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 OR1N1Q8NGS0 311 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 APOBEC4Q8WW27 367 aaKnown RBP18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 RMND5BQ96G75 393 aaPredicted RBP18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 PADI1Q9ULC6 663 aa18.08■□□□□ 0.49
EFCAB11-202ENST00000538485 DLL1O00548 723 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 DEAF1O75398 565 aaPredicted RBP18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 STX11O75558 287 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 DIRAS1O95057 198 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 NHLH1Q02575 133 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 C6orf15Q6UXA7 325 aaPredicted RBP18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 TSEN54Q7Z6J9 526 aaKnown RBP18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 COMTD1Q86VU5 262 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 MARCH9Q86YJ5 346 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 MORN4Q8NDC4 146 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 RASSF5Q8WWW0 418 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 EME1Q96AY2 570 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 C8orf44Q96CB5 159 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 ART5Q96L15 291 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 SLC46A1Q96NT5 459 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 CIB1Q99828 191 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 WDR77Q9BQA1 342 aaPredicted RBP18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 SPATA5L1Q9BVQ7 753 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 BAG5Q9UL15 447 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 PADI2Q9Y2J8 665 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 GPR55Q9Y2T6 319 aaPredicted RBP18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 PRSS23O95084 383 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 AK1P00568 194 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 UMODP07911 640 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 GPR68Q15743 365 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 GRAMD1BQ3KR37 738 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 PIWIL3Q7Z3Z3 882 aaKnown RBP18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 KBTBD2Q8IY47 623 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 VPS50Q96JG6 964 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 BTBD9Q96Q07 612 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 BDH2Q9BUT1 245 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 KLHL4Q9C0H6 718 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 SAP130Q9H0E3 1048 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 MTHFD2LQ9H903 347 aaPredicted RBP18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 Q9N2J8 555 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 DNAJB9Q9UBS3 223 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 COPS7AQ9UBW8 275 aa18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 PTRH2Q9Y3E5 179 aaKnown RBP18.07■□□□□ 0.48
EFCAB11-202ENST00000538485 SAGE2PA6NJ88 616 aa18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 EPPINO95925 133 aa18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 CYC1P08574 325 aa18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 CCNYL3P0C7X3 344 aa18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 PABPC4LP0CB38 370 aaKnown RBP18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 CEACAM1P13688 526 aa18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 TRHRP34981 398 aaPredicted RBP18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 RFX3P48380 749 aa18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 CPEB2Q7Z5Q1 589 aaKnown RBP18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 ZAR1Q86SH2 424 aa18.06■□□□□ 0.48
EFCAB11-202ENST00000538485 VRK2Q86Y07 508 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms