RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ZC3H14Q6PJT7 736 aaKnown RBP6.31□□□□□ -1.4
USP28-207ENST00000538475 CORO6Q6QEF8 472 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 Q6ZPB1 254 aaPredicted RBP6.31□□□□□ -1.4
USP28-207ENST00000538475 TSPAN33Q86UF1 283 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ZNF683Q8IZ20 524 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 C10orf111Q8N326 155 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 FTMTQ8N4E7 242 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ARIH2OSQ8N7S6 290 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 DTX3Q8N9I9 347 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 AQP11Q8NBQ7 271 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ARRDC4Q8NCT1 418 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 GPR26Q8NDV2 337 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 DBF4BQ8NFT6 615 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 OR52N2Q8NGI0 321 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 OR52I1Q8NGK6 324 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 OR5M9Q8NGP3 310 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 OR13C4Q8NGS5 318 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 CEP76Q8TAP6 659 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 TEX47Q8TBZ9 253 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 SELENOMQ8WWX9 145 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 KAT2AQ92830 837 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 RIT1Q92963 219 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 RGMAQ96B86 450 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 C11orf24Q96F05 449 aaPredicted RBP6.31□□□□□ -1.4
USP28-207ENST00000538475 UROC1Q96N76 676 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 SFXN2Q96NB2 322 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 C8orf37Q96NL8 207 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 HIST1H2AJQ99878 128 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 MYOCQ99972 504 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 SEMA3CQ99985 751 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 MGME1Q9BQP7 344 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ACBD6Q9BR61 282 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ZNF251Q9BRH9 671 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 DUSP26Q9BV47 211 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 CACNG6Q9BXT2 260 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 TEX12Q9BXU0 123 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ADGRE3Q9BY15 652 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ACPTQ9BZG2 426 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 PITHD1Q9GZP4 211 aaPredicted RBP6.31□□□□□ -1.4
USP28-207ENST00000538475 BTBD1Q9H0C5 482 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 OSGEPL1Q9H4B0 414 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 NMNAT1Q9HAN9 279 aaPredicted RBP6.31□□□□□ -1.4
USP28-207ENST00000538475 BRF2Q9HAW0 419 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 GPN1Q9HCN4 374 aaPredicted RBP6.31□□□□□ -1.4
USP28-207ENST00000538475 MED17Q9NVC6 651 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 GPRC5BQ9NZH0 403 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ABRACLQ9P1F3 81 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ZNF624Q9P2J8 865 aaPredicted RBP6.31□□□□□ -1.4
USP28-207ENST00000538475 GULP1Q9UBP9 304 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 EXTL2Q9UBQ6 330 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 PPT2Q9UMR5 302 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 GABRQQ9UN88 632 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 ANGPT4Q9Y264 503 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 POLR3KQ9Y2Y1 108 aaPredicted RBP6.31□□□□□ -1.4
USP28-207ENST00000538475 RAI2Q9Y5P3 530 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 NPFFR2Q9Y5X5 522 aa6.31□□□□□ -1.4
USP28-207ENST00000538475 HELZP42694 1942 aaKnown RBP6.31□□□□□ -1.4
USP28-207ENST00000538475 KCNE1BA0A087WTH5 132 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 RAB19A4D1S5 217 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 A8MUA0 341 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 CHURC1-FNTBB4DL54 471 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 LOC730098B7Z3J9 87 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SMLR1H3BR10 107 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 CLDN5O00501 218 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 MAN2B1O00754 1011 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SCAMP2O15127 329 aaKnown RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 LRRTM2O43300 516 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SDC3O75056 442 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 NIPSNAP2O75323 286 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 PAPLNO95428 1278 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 PDYNP01213 254 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 RB1P06400 928 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 S100A9P06702 114 aaKnown RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 HEXAP06865 529 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 C8GP07360 202 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SAGP10523 405 aaPredicted RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 COX7A2P14406 83 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 IFNGR1P15260 489 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 PAX6P26367 422 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 BTCP35070 178 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 VEGFCP49767 419 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 CRYBA2P53672 197 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ARPP19P56211 112 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 PCBP3P57721 371 aaKnown RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 TSPAN5P62079 268 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 HMGCS1Q01581 520 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 MXD1Q05195 221 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 FOXD4Q12950 439 aaPredicted RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 GK2Q14410 553 aaPredicted RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 P2RY14Q15391 338 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 GUCA2BQ16661 112 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 UGT8Q16880 541 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 MPEG1Q2M385 716 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 XKR6Q5GH73 641 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 TEX30Q5JUR7 227 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 CPTPQ5TA50 214 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 LIPJQ5W064 366 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SLC36A4Q6YBV0 504 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 GLT6D1Q7Z4J2 308 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 KIAA0907Q7Z7F0 614 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms