RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 RNASET2O00584 256 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 PLPP1O14494 284 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 HDAC3O15379 428 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CHST10O43529 356 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 PCDH7O60245 1069 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 B4GALT2O60909 372 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SNNO75324 88 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ATP6AP2O75787 350 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CDC123O75794 336 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 NCR1O76036 304 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 AGFG2O95081 481 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ETHE1O95571 254 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 GBAP04062 536 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CD1AP06126 327 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 KLK1P06870 262 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ANXA4P09525 319 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 RAB40ALP0C0E4 278 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 FAM58BPP0C7Q3 252 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 UBTFL6P0CB48 400 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 NR2F6P10588 404 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 IL10P22301 178 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CPN2P22792 545 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 GCSHP23434 173 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ATP5A1P25705 553 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 TIA1P31483 386 aaKnown RBP eCLIP4.03□□□□□ -1.764e-6■■■■□ 22.9
SNHG1-208ENST00000538266 ARRB2P32121 409 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 GSTM5P46439 218 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 HTR6P50406 440 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CLCN2P51788 898 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 UCNP55089 124 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ACTR3P61158 418 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 RPL38P63173 70 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 OLR1P78380 273 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 MAT1AQ00266 395 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 HMGCS1Q01581 520 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 MC1RQ01726 317 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 BTKQ06187 659 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SLC13A2Q13183 592 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 MAD2L1Q13257 205 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SLAMF1Q13291 335 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 DNASE1L3Q13609 305 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 TGIF1Q15583 401 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 RNF220Q5VTB9 566 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CES4AQ5XG92 561 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 NXNQ6DKJ4 435 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 FAM199XQ6PEV8 388 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ZNF517Q6ZMY9 492 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 RNF165Q6ZSG1 346 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SHISA6Q6ZSJ9 500 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 PRSS41Q7RTY9 318 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 TIPARPQ7Z3E1 657 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 DHDDSQ86SQ9 333 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 VASH2Q86V25 355 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 GPR180Q86V85 440 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 PDSS2Q86YH6 399 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 PRSS58Q8IYP2 241 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ZCCHC7Q8N3Z6 543 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 AMER3Q8N944 861 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 FAM47BQ8NA70 645 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 FNDC5Q8NAU1 212 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 RBM15BQ8NDT2 890 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 OR5T3Q8NGG3 340 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 OR56A1Q8NGH5 318 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 OR2Y1Q8NGV0 311 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 OR6Y1Q8NGX8 325 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CDC26Q8NHZ8 85 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 WDR60Q8WVS4 1066 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 METTL21AQ8WXB1 218 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 STARD8Q92502 1023 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 METTL2AQ96IZ6 378 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 VPS50Q96JG6 964 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 PPP3R2Q96LZ3 170 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CCNL2Q96S94 520 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 NEU1Q99519 415 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SORT1Q99523 831 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CRB3Q9BUF7 120 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 FAIM2Q9BWQ8 316 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SORBS1Q9BX66 1292 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 NPLQ9BXD5 320 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 EBPLQ9BY08 206 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 NUF2Q9BZD4 464 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 DPH1Q9BZG8 443 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SPRY4Q9C004 299 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 C20orf27Q9GZN8 174 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 C1orf21Q9H246 121 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 Q9H521 79 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ACTL8Q9H568 366 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 DDX31Q9H8H2 851 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 KCNK13Q9HB14 408 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 LRTM1Q9HBL6 345 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 LYRM4Q9HD34 91 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 AKIP1Q9NQ31 210 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 C1orf109Q9NX04 203 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 LYARQ9NX58 379 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 TAS2R1Q9NYW7 299 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 JKAMPQ9P055 326 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 NDUFA13Q9P0J0 144 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ARMCX1Q9P291 453 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CTSFQ9UBX1 484 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms