RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 WDPCPO95876 746 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 GCH1P30793 250 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 RGNQ15493 299 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 TMEM52BQ4KMG9 183 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 C14orf28Q4W4Y0 310 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 BLOC1S3Q6QNY0 202 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 VHLLQ6RSH7 139 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 VTCN1Q7Z7D3 282 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 NRMQ8IXM6 262 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 SLC44A3Q8N4M1 653 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 LINC01465Q8N7H1 131 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 GATAD2BQ8WXI9 593 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 FER1L6-AS2Q96M78 137 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 SLC5A7Q9GZV3 580 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 SLC6A14Q9UN76 642 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 GXYLT2A0PJZ3 443 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 G3V2L1 256 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 HOXC11O43248 304 aaPredicted RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 ZNF749O43361 778 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ELK4P28324 431 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ADRA1AP35348 466 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 GLP1RP43220 463 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 SSR4P51571 173 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 TAS2R43P59537 309 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 E2F1Q01094 437 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 SLC14A2Q15849 920 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 GTDC1Q4AE62 458 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 TMEM53Q6P2H8 277 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ZNF613Q6PF04 617 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 OR1J4Q8NGS1 313 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 CCDC120Q96HB5 630 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 NUFIP1Q9UHK0 495 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 TMPRSS11EQ9UL52 423 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 PCDHGA3Q9Y5H0 932 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 BCORQ6W2J9 1755 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ARL6IP5O75915 188 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 PNMTP11086 282 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 KDELR2P33947 212 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 MMP12P39900 470 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 SLC6A8P48029 635 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ACADVLP49748 655 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ARHGAP11AQ6P4F7 1023 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ZNF615Q8N8J6 731 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 DENND6BQ8NEG7 585 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 CNIH3Q8TBE1 160 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 PROKR1Q8TCW9 393 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ELP5Q8TE02 316 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ZUFSPQ96AP4 578 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 OR4K3Q96R72 315 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ACPTQ9BZG2 426 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 USP36Q9P275 1121 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 ZNF69Q9UC07 566 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 EVPLQ92817 2033 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 THSD7AQ9UPZ6 1657 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 LOC102723532A0A0G2JNH3 316 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 TRAPPC13A5PLN9 417 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MROH6A6NGR9 719 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 CLIC3O95833 236 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 IGHEP01854 428 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 GSTM2P28161 218 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 RPS5P46782 204 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 TFF2Q03403 129 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 GRIK2Q13002 908 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SFT2D3Q587I9 215 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 PLEKHG7Q6ZR37 379 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 GRAMD2AQ8IUY3 354 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 HPS1Q92902 700 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 NUDT22Q9BRQ3 303 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ATG5Q9H1Y0 275 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SEMA6CQ9H3T2 930 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 GSTO2Q9H4Y5 243 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 TMEM9BQ9NQ34 198 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MARF1Q9Y4F3 1742 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 ICAM2P13598 275 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 IL32P24001 234 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 HTR1EP28566 365 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 CCR2P41597 374 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 AP2S1P53680 142 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 S100A10P60903 97 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 CDKL1Q00532 357 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 EIF2B1Q14232 305 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 SPATS1Q496A3 300 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ALG10Q5BKT4 473 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ATAD3CQ5T2N8 411 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 LHFPL3Q86UP9 236 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ADIPOR2Q86V24 386 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ZADH2Q8N4Q0 377 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 PSD4Q8NDX1 1056 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ZNF775Q96BV0 537 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 CNN2Q99439 309 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 TMEM121BQ9BXQ6 578 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 SATB2Q9UPW6 733 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 GPR52Q9Y2T5 361 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ADAM18Q9Y3Q7 739 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SOBPA7XYQ1 873 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 LCATP04180 440 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 DLSTP36957 453 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MAGEA8P43361 318 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 RAB38P57729 211 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 CSNK2A1P68400 391 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms