RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CFLARO15519 480 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 RFPL3SP0C7P2 107 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 NPIPA8P0DM63 369 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 CYP4B1P13584 511 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 UQCRFS1P47985 274 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 MEOX1P50221 254 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 ARFIP2P53365 341 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 PLCXD2Q0VAA5 305 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 RPS6KA2Q15349 733 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 MAPKAPK3Q16644 382 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 DPY19L1Q2PZI1 675 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 VPS26BQ4G0F5 336 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 AGKQ53H12 422 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 OPN5Q6U736 354 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 APOOLQ6UXV4 268 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 RTL4Q6ZR62 310 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 PRICKLE2Q7Z3G6 844 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 TREML1Q86YW5 311 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 CHERPQ8IWX8 916 aaKnown RBP12.01□□□□□ -0.49
CHFR-216ENST00000538235 SLC15A4Q8N697 577 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 GLB1L3Q8NCI6 653 aaPredicted RBP12.01□□□□□ -0.49
CHFR-216ENST00000538235 FAM13CQ8NE31 585 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 OR2M7Q8NG81 312 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 PNPT1Q8TCS8 783 aaKnown RBP12.01□□□□□ -0.49
CHFR-216ENST00000538235 SPPL2AQ8TCT8 520 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 MIB2Q96AX9 1013 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 HSPBAP1Q96EW2 488 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 RMND5BQ96G75 393 aaPredicted RBP12.01□□□□□ -0.49
CHFR-216ENST00000538235 SIKE1Q9BRV8 207 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 FAM107BQ9H098 131 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 GALNT9Q9HCQ5 603 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 NEUROD4Q9HD90 331 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 ARMCX1Q9P291 453 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 ABI3Q9P2A4 366 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 LIPGQ9Y5X9 500 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 C2orf72A6NCS6 295 aa12□□□□□ -0.49
CHFR-216ENST00000538235 ICOSLGO75144 302 aa12□□□□□ -0.49
CHFR-216ENST00000538235 BCAS2O75934 225 aaPredicted RBP12□□□□□ -0.49
CHFR-216ENST00000538235 CELA3AP09093 270 aa12□□□□□ -0.49
CHFR-216ENST00000538235 TROVE2P10155 538 aaKnown RBP eCLIP12□□□□□ -0.49
CHFR-216ENST00000538235 NCF2P19878 526 aaPredicted RBP12□□□□□ -0.49
CHFR-216ENST00000538235 GABRA3P34903 492 aa12□□□□□ -0.49
CHFR-216ENST00000538235 RNF144AP50876 292 aaPredicted RBP12□□□□□ -0.49
CHFR-216ENST00000538235 GAS1P54826 345 aa12□□□□□ -0.49
CHFR-216ENST00000538235 MRPS22P82650 360 aaKnown RBP12□□□□□ -0.49
CHFR-216ENST00000538235 PLAURQ03405 335 aa12□□□□□ -0.49
CHFR-216ENST00000538235 SELPLGQ14242 412 aa12□□□□□ -0.49
CHFR-216ENST00000538235 HLA-DQA1Q5Y7H0 255 aa12□□□□□ -0.49
CHFR-216ENST00000538235 RPUSD3Q6P087 351 aaKnown RBP12□□□□□ -0.49
CHFR-216ENST00000538235 CDC73Q6P1J9 531 aa12□□□□□ -0.49
CHFR-216ENST00000538235 TNFAIP8L2Q6P589 184 aaPredicted RBP12□□□□□ -0.49
CHFR-216ENST00000538235 FIGNL1Q6PIW4 674 aa12□□□□□ -0.49
CHFR-216ENST00000538235 C6orf120Q7Z4R8 191 aa12□□□□□ -0.49
CHFR-216ENST00000538235 FGD2Q7Z6J4 655 aa12□□□□□ -0.49
CHFR-216ENST00000538235 FBXW8Q8N3Y1 598 aa12□□□□□ -0.49
CHFR-216ENST00000538235 HORMAD2Q8N7B1 307 aa12□□□□□ -0.49
CHFR-216ENST00000538235 GOLM1Q8NBJ4 401 aa12□□□□□ -0.49
CHFR-216ENST00000538235 FAM110BQ8TC76 370 aa12□□□□□ -0.49
CHFR-216ENST00000538235 ZFP90Q8TF47 636 aa12□□□□□ -0.49
CHFR-216ENST00000538235 SLC9A6Q92581 669 aa12□□□□□ -0.49
CHFR-216ENST00000538235 RAB8BQ92930 207 aa12□□□□□ -0.49
CHFR-216ENST00000538235 SPDL1Q96EA4 605 aa12□□□□□ -0.49
CHFR-216ENST00000538235 RILPQ96NA2 401 aa12□□□□□ -0.49
CHFR-216ENST00000538235 OR7D2Q96RA2 312 aa12□□□□□ -0.49
CHFR-216ENST00000538235 ADOQ96SZ5 270 aa12□□□□□ -0.49
CHFR-216ENST00000538235 PRPF18Q99633 342 aaKnown RBP12□□□□□ -0.49
CHFR-216ENST00000538235 ELAC2Q9BQ52 826 aaKnown RBP12□□□□□ -0.49
CHFR-216ENST00000538235 SLX1AQ9BQ83 275 aa12□□□□□ -0.49
CHFR-216ENST00000538235 SLC35A5Q9BS91 424 aa12□□□□□ -0.49
CHFR-216ENST00000538235 KCNE5Q9UJ90 142 aa12□□□□□ -0.49
CHFR-216ENST00000538235 PCDHGB6Q9Y5F9 930 aa12□□□□□ -0.49
CHFR-216ENST00000538235 GCN1Q92616 2671 aaKnown RBP11.99□□□□□ -0.49
CHFR-216ENST00000538235 CCDC154A6NI56 674 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 FXYD1O00168 92 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 ACOX3O15254 700 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 SLC28A2O43868 658 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 PEX1O43933 1283 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 SNX3O60493 162 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 GLSO94925 669 aaPredicted RBP11.99□□□□□ -0.49
CHFR-216ENST00000538235 KCNK2O95069 426 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 PLA2G2AP14555 144 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 CASP3P42574 277 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 DCAF7P61962 342 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 HSF1Q00613 529 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 KLF10Q13118 480 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHFR-216ENST00000538235 DLEU7Q6UYE1 221 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 SPATA21Q7Z572 469 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 RNF130Q86XS8 419 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 GPALPP1Q8IXQ4 340 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 CDRT4Q8N9R6 151 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 ZFP62Q8NB50 900 aaPredicted RBP11.99□□□□□ -0.49
CHFR-216ENST00000538235 OR56A1Q8NGH5 318 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 CPT1CQ8TCG5 803 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 JADE3Q92613 823 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 ARSGQ96EG1 525 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 NEURL3Q96EH8 262 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 SLC35G5Q96KT7 338 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 C5orf34Q96MH7 638 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 PHF12Q96QT6 1004 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms