RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ZNF383Q8NA42 475 aa8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 OR9Q2Q8NGE9 314 aa8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 OR6X1Q8NH79 312 aa8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 PHYHIPLQ96FC7 376 aa8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 ABHD1Q96SE0 405 aa8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 FUZQ9BT04 418 aa8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 MRPL37Q9BZE1 423 aaKnown RBP8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 FAM86C1Q9NVL1 165 aa8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 ZNF69Q9UC07 566 aa8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 OR10H1Q9Y4A9 318 aa8.05□□□□□ -1.12
SRGAP1-202ENST00000537556 OR6C74A6NCV1 312 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 URADA6NGE7 173 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 YDJCA8MPS7 323 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 SNRPGP15A8MWD9 76 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 NPIPB9F8W1W9 429 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 M0QYT0 321 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 MSCO60682 206 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 OTCP00480 354 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 IGF2P01344 180 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 IFNA2P01563 188 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 HCKP08631 526 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 GPX2P18283 190 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 UQCRC2P22695 453 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CERS1P27544 350 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 S100A2P29034 98 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 PTPN6P29350 595 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CHRNA4P43681 627 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 NPBWR1P48145 328 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 GABREP78334 506 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 MAT1AQ00266 395 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 HEPACAMQ14CZ8 416 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 TOMM20Q15388 145 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 TARBP2Q15633 366 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 GLDNQ6ZMI3 551 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 MSANTD1Q6ZTZ1 278 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 ZNF551Q7Z340 670 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 MILR1Q7Z6M3 343 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 NUDT13Q86X67 352 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 NKAPQ8N5F7 415 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 ZNF511Q8NB15 262 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CHST14Q8NCH0 376 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 SLC22A18Q96BI1 424 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CNTNAP3BQ96NU0 1288 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 TRIM62Q9BVG3 475 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 GPR61Q9BZJ8 451 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 ABCG8Q9H221 673 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 NANSQ9NR45 359 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 TMPRSS4Q9NRS4 437 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 TAS2R13Q9NYV9 303 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 KCNIP3Q9Y2W7 256 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 A0A087X0M5 115 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 A0A1B0GX30 115 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 NAP1L6A6NFF2 107 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 UBL3O95164 117 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 MT-ND4LP03901 98 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 MT-ND4P03905 459 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CD3GP09693 182 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 OR8U8P0C7N1 319 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 GKN3PP0CG01 181 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 NQO2P16083 231 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 HOXB9P17482 250 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 ADCYAP1P18509 176 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 RCC1P18754 421 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 PMELP40967 661 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 STAT5AP42229 794 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CD81P60033 236 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 SELENOWP63302 87 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CXADRP78310 365 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 ELAVL2Q12926 359 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 MARCH8Q5T0T0 291 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 THEM4Q5T1C6 240 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CDC42EP5Q6NZY7 148 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 BAIAP2L2Q6UXY1 529 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 TMPRSS11FQ6ZWK6 438 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 AQP11Q8NBQ7 271 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 OR52I1Q8NGK6 324 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 SH3RF2Q8TEC5 729 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 SMAP2Q8WU79 429 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 KLRG1Q96E93 195 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 FAIM2Q9BWQ8 316 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 TLNRD1Q9H1K6 362 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 ATXN3LQ9H3M9 355 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CA10Q9NS85 328 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 POLLQ9UGP5 575 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 ARRDC5A6NEK1 342 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 MARCH11A6NNE9 402 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 LRRN3E7EW58 273 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 H7C0S8 307 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 BEST1O76090 585 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 ICAM1P05362 532 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 EIF4EP06730 217 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 NR2C1P13056 603 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CRABP1P29762 137 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 MNDAP41218 407 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 PKIAP61925 76 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 RPS14P62263 151 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 TDGQ13569 410 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 USF2Q15853 346 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 IFI44LQ53G44 452 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 SLC30A6Q6NXT4 461 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms