RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 POMZP3Q6PJE2 187 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 QSOX2Q6ZRP7 698 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 OTOP2Q7RTS6 562 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 RANBP3LQ86VV4 465 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 MCATQ8IVS2 390 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 OR6M1Q8NGM8 313 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 UCN3Q969E3 161 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 RELTQ969Z4 430 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SEC22CQ9BRL7 303 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CARS2Q9HA77 564 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 NMNAT1Q9HAN9 279 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 RPS10P5Q9NQ39 176 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 GSKIPQ9P0R6 139 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SLC23A1Q9UHI7 598 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF780BQ9Y6R6 833 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 A0A1B0GV50 99 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 A8MXK9 166 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 QSOX1O00391 747 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 IMPA2O14732 288 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 AGPAT2O15120 278 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 MMP20O60882 483 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 FGF18O76093 207 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 C22orf31O95567 290 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 GIMD1P0DJR0 217 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CKBP12277 381 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 LAMP2P13473 410 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CPN1P15169 458 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 APEX1P27695 318 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ACVRL1P37023 503 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CLDN8P56748 225 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 DHODHQ02127 395 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ZNHIT3Q15649 155 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 PLK5Q496M5 336 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 TMEM201Q5SNT2 666 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 TMEM69Q5SWH9 247 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CEACAM20Q6UY09 585 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 RD3Q7Z3Z2 195 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 NLGN4XQ8N0W4 816 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SPICQ8N5J4 248 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SLC32A1Q9H598 525 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 UCK1Q9HA47 277 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SH2B3Q9UQQ2 575 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SLC6A5Q9Y345 797 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 LRG1P02750 347 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 RPN2P04844 631 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ACSM4P0C7M7 580 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 PGAM2P15259 253 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 GNALP38405 381 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 LIMK1P53667 647 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SEC23BQ15437 767 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 B3GLCTQ6Y288 498 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 DBX2Q6ZNG2 339 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 TPRA1Q86W33 373 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 NXPE1Q8N323 547 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 OR2L3Q8NG85 312 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SMAP2Q8WU79 429 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SLC2A13Q96QE2 648 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SDHCQ99643 169 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 KCNJ15Q99712 375 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 EIF5A2Q9GZV4 153 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 RNF186Q9NXI6 227 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 NPIPB8E9PQR5 432 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 TGFB1P01137 390 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 C8GP07360 202 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SPARCP09486 303 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 GABRA5P31644 462 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 GJA5P36382 358 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 BEX3Q00994 111 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 RAB40BQ12829 278 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 TPBGQ13641 420 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 PTGES3Q15185 160 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 BATFQ16520 125 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 EIF2S3LQ2VIR3 472 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 LRRC73Q5JTD7 316 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 GTPBP8Q8N3Z3 284 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF676Q8N7Q3 588 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SCMH1Q96GD3 660 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ACSL6Q9UKU0 697 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 KLK1P06870 262 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 TLX1P31314 330 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 DLSTP36957 453 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ARL4DP49703 201 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ARSDP51689 593 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SNRPD1P62314 119 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ACVR1Q04771 509 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 MAP2K5Q13163 448 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 TCTE1Q5JU00 501 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 PDZD3Q86UT5 571 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 MON1AQ86VX9 555 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 C17orf64Q86WR6 236 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF227Q86WZ6 799 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 HDDC3Q8N4P3 179 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 NANPQ8TBE9 248 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CNOT9Q92600 299 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 PHYHIPLQ96FC7 376 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 LRRC46Q96FV0 321 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CPPED1Q9BRF8 314 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF649Q9BS31 505 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms